G1517465


Basic Information

Item Value
gene id G1517465
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12960141 ~ 12980331 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737045
ggggtattgtgcgtagattgagcaggatttttacaaatgtaatccattttagaataaggctgtaacttaataaAATGTggatcaaggggtctgaatacaaatGCATTGTACAGTAATAGTACGTACTCTAAGGAGTAGGTGAGGCTGTAGGTGATGTTGTCATCACTCTCTGAGTTGTTGTCAAGGGGATGCCACCAGCAGGTGAAGACCTCCATGTTGGGCGAGCGGCAGTAGTAGATGTGGGGCCGGGTCGTCACGGCAACAGCACCTGGGGGATAAAACGAGAGGTTAATGACTCTAACAGTCTCTATGGATATCTGCATTCACTGTCGGCTTTTTCTAACAGACTGATATATTTTTC

Function

NR:

description
prolactin receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737045 True 361 lncRNA 0.44 2 12960141 12980331

Neighbor

gene id symbol gene type direction distance location
cd3z cd3z coding upstream 61406 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 74510 12882511 ~ 12885631 (+)
LOC110495518 LOC106574650 coding upstream 81030 12874477 ~ 12879111 (+)
LOC110527205 pcid2 coding upstream 130591 12749923 ~ 12829550 (+)
LOC110497015 tmem131 coding upstream 306385 12622325 ~ 12653756 (+)
gp91phox cybb coding downstream 94733 13075064 ~ 13080819 (+)
LOC110495507 LOC106574647 coding downstream 122298 13102629 ~ 13132209 (+)
LOC118941099 LOC106574646 coding downstream 152786 13133117 ~ 13134843 (+)
LOC118941100 NA coding downstream 409698 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 469826 13450157 ~ 13451678 (+)
G1517458 NA non-coding upstream 3623 12947371 ~ 12956518 (+)
G1517459 LOC106575727 non-coding upstream 11402 12948307 ~ 12948739 (+)
G1517454 NA non-coding upstream 30173 12928924 ~ 12929968 (+)
G1517452 NA non-coding upstream 35505 12924399 ~ 12924636 (+)
G1517416 NA non-coding upstream 57161 12898810 ~ 12902980 (+)
G1517489 NA non-coding downstream 42719 13023050 ~ 13024564 (+)
G1517501 NA non-coding downstream 63369 13043700 ~ 13047381 (+)
G1517506 NA non-coding downstream 70896 13051227 ~ 13052078 (+)
G1517511 NA non-coding downstream 80037 13060368 ~ 13060660 (+)
G1517519 NA non-coding downstream 110138 13090469 ~ 13091536 (+)
G1517457 NA other upstream 17647 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 23863 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 87978 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1019036 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1316383 11642789 ~ 11643758 (+)
G1517545 NA other downstream 206770 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1454431 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1518455 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1575995 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1833651 14813982 ~ 14814886 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06362136_06376918 NA coding CI01000299 null 6362004 ~ 6377235 (-)