G1517468


Basic Information

Item Value
gene id G1517468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12964215 ~ 12970187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737048
gtgaagaagagacagaggaaacaggagggatagcagacattaaacatttcacatgacaagagacgttccaggagaggatagaattactagaccaattaatggaaggattatgacaaactagccagggatggcccaaaacaacaggtgtaaaaggtgaacgaaaaatcaaaaaagaaatggtttcgctatgattaccagaaacagtgagggttaaaggtagcgtctcacgctgaatcctggggagaggactaccatccagggcgaacaaggctgtggactcccttaactgtctgagaggaatgtcatgttcccgagcccaggtctcgtccataaaacagccctccgccccagagtctattaaggcactgcaggaagctgacgaaccggtccagcgtagatggaccgacaaggtagtgcaggatcttgaaggagagacaggagtagtag

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737048 True 447 lncRNA 0.48 2 12964215 12970187

Neighbor

gene id symbol gene type direction distance location
cd3z cd3z coding upstream 65480 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 78584 12882511 ~ 12885631 (+)
LOC110495518 LOC106574650 coding upstream 85104 12874477 ~ 12879111 (+)
LOC110527205 pcid2 coding upstream 134665 12749923 ~ 12829550 (+)
LOC110497015 tmem131 coding upstream 310459 12622325 ~ 12653756 (+)
gp91phox cybb coding downstream 104877 13075064 ~ 13080819 (+)
LOC110495507 LOC106574647 coding downstream 132442 13102629 ~ 13132209 (+)
LOC118941099 LOC106574646 coding downstream 162930 13133117 ~ 13134843 (+)
LOC118941100 NA coding downstream 419842 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 479970 13450157 ~ 13451678 (+)
G1517458 NA non-coding upstream 7697 12947371 ~ 12956518 (+)
G1517459 LOC106575727 non-coding upstream 15476 12948307 ~ 12948739 (+)
G1517454 NA non-coding upstream 34247 12928924 ~ 12929968 (+)
G1517452 NA non-coding upstream 39579 12924399 ~ 12924636 (+)
G1517416 NA non-coding upstream 61235 12898810 ~ 12902980 (+)
G1517489 NA non-coding downstream 52863 13023050 ~ 13024564 (+)
G1517501 NA non-coding downstream 73513 13043700 ~ 13047381 (+)
G1517506 NA non-coding downstream 81040 13051227 ~ 13052078 (+)
G1517511 NA non-coding downstream 90181 13060368 ~ 13060660 (+)
G1517519 NA non-coding downstream 120282 13090469 ~ 13091536 (+)
G1517457 NA other upstream 21721 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 27937 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 92052 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1023110 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1320457 11642789 ~ 11643758 (+)
G1517545 NA other downstream 216914 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1464575 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1528599 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1586139 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1843795 14813982 ~ 14814886 (+)

Expression


Co-expression Network