G1517519


Basic Information

Item Value
gene id G1517519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13090469 ~ 13091536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737106
CTACTTGTTAGGCCCATGATTAGGCTCCATGTTGTTACTTATCTCCACTACTTGTTAGGCCCATGATTAGGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCAATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTATGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTAGGCTCCAGGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTAGGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTAGGCTCCATGTTGTTATTCATCTCCACTACTTGTTAGGCCCATGATTATGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCAATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTATGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCAATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTATGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTAGGCTCCATGTTGTTATTCATCTCCACTACTTGTTAGGCCCATGATTATGCTCCATGTTGTTACTTATATCCACTACTTGTTAGGCCCATGATTAGGCTCCAGGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737106 True 657 lncRNA 0.40 2 13090469 13091536

Neighbor

gene id symbol gene type direction distance location
gp91phox cybb coding upstream 9650 13075064 ~ 13080819 (+)
cd3z cd3z coding upstream 191734 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 204838 12882511 ~ 12885631 (+)
LOC110495518 LOC106574650 coding upstream 211358 12874477 ~ 12879111 (+)
LOC110527205 pcid2 coding upstream 260919 12749923 ~ 12829550 (+)
LOC110495507 LOC106574647 coding downstream 11093 13102629 ~ 13132209 (+)
LOC118941099 LOC106574646 coding downstream 41581 13133117 ~ 13134843 (+)
LOC118941100 NA coding downstream 298493 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 358621 13450157 ~ 13451678 (+)
LOC110495498 LOC106574751 coding downstream 383538 13475074 ~ 13503268 (+)
G1517511 NA non-coding upstream 29809 13060368 ~ 13060660 (+)
G1517506 NA non-coding upstream 38391 13051227 ~ 13052078 (+)
G1517501 NA non-coding upstream 43088 13043700 ~ 13047381 (+)
G1517489 NA non-coding upstream 65905 13023050 ~ 13024564 (+)
G1517468 NA non-coding upstream 120282 12964215 ~ 12970187 (+)
G1517528 NA non-coding downstream 45409 13136945 ~ 13137243 (+)
G1517536 NA non-coding downstream 66197 13157733 ~ 13158166 (+)
G1517539 NA non-coding downstream 74118 13165654 ~ 13165876 (+)
G1517540 NA non-coding downstream 74701 13166237 ~ 13166465 (+)
G1517543 NA non-coding downstream 85580 13177116 ~ 13182157 (+)
G1517457 NA other upstream 147975 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 154191 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 218306 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1149364 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1446711 11642789 ~ 11643758 (+)
G1517545 NA other downstream 95565 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1343226 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1407250 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1464790 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1722446 14813982 ~ 14814886 (+)

Expression


Co-expression Network