G1517539


Basic Information

Item Value
gene id G1517539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13165654 ~ 13165876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737127
agcctctccctccctttctctatcGCGCTACagctttgtctctctgtctctctctccttctgtctgtcatCTTCAGCGGCACTAGAGCAAGGGAGCGTGACACtatcagacaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctctctgTTGAGCAGCGGAGCGGATGCCTGGCAGCTTTGTCTGGCcttgtgtgtgtacaggtgcacagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737127 True 223 lncRNA 0.55 1 13165654 13165876

Neighbor

gene id symbol gene type direction distance location
LOC118941099 LOC106574646 coding upstream 30811 13133117 ~ 13134843 (+)
LOC110495507 LOC106574647 coding upstream 33445 13102629 ~ 13132209 (+)
gp91phox cybb coding upstream 84835 13075064 ~ 13080819 (+)
cd3z cd3z coding upstream 266919 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 280023 12882511 ~ 12885631 (+)
LOC118941100 NA coding downstream 224153 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 284281 13450157 ~ 13451678 (+)
LOC110495498 LOC106574751 coding downstream 309198 13475074 ~ 13503268 (+)
LOC110495496 NA coding downstream 350466 13516342 ~ 13518076 (+)
trnaa-ugc-135 NA coding downstream 351086 13516962 ~ 13517036 (+)
G1517536 NA non-coding upstream 7488 13157733 ~ 13158166 (+)
G1517528 NA non-coding upstream 28411 13136945 ~ 13137243 (+)
G1517519 NA non-coding upstream 74118 13090469 ~ 13091536 (+)
G1517511 NA non-coding upstream 104994 13060368 ~ 13060660 (+)
G1517506 NA non-coding upstream 113576 13051227 ~ 13052078 (+)
G1517540 NA non-coding downstream 361 13166237 ~ 13166465 (+)
G1517543 NA non-coding downstream 11240 13177116 ~ 13182157 (+)
G1517544 NA non-coding downstream 19968 13185844 ~ 13186079 (+)
G1517551 NA non-coding downstream 52571 13218447 ~ 13218661 (+)
G1518292 NA non-coding downstream 136717 13302593 ~ 13302811 (+)
G1517457 NA other upstream 223160 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 229376 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 293491 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1224549 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1521896 11642789 ~ 11643758 (+)
G1517545 NA other downstream 21225 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1268886 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1332910 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1390450 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1648106 14813982 ~ 14814886 (+)

Expression


Co-expression Network