G1517551


Basic Information

Item Value
gene id G1517551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13218447 ~ 13218661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737139
catcaatttacagaaatactcataataaacattgataaaagatacaactattatgcacgGAATTagagatacacttctccttaatgcaaccgctgtgtcagatttcaaaaaaactttacggaaaaagcacaccatgctataatctgagtacggcgctcagagaccaaaacaacccaaacagatatccgccatgttgtgtagtcaacagaagtcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737139 True 215 lncRNA 0.37 1 13218447 13218661

Neighbor

gene id symbol gene type direction distance location
LOC118941099 LOC106574646 coding upstream 83604 13133117 ~ 13134843 (+)
LOC110495507 LOC106574647 coding upstream 86238 13102629 ~ 13132209 (+)
gp91phox cybb coding upstream 137628 13075064 ~ 13080819 (+)
cd3z cd3z coding upstream 319712 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 332816 12882511 ~ 12885631 (+)
LOC118941100 NA coding downstream 171368 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 231496 13450157 ~ 13451678 (+)
LOC110495498 LOC106574751 coding downstream 256413 13475074 ~ 13503268 (+)
LOC110495496 NA coding downstream 297681 13516342 ~ 13518076 (+)
trnaa-ugc-135 NA coding downstream 298301 13516962 ~ 13517036 (+)
G1517544 NA non-coding upstream 32368 13185844 ~ 13186079 (+)
G1517543 NA non-coding upstream 36290 13177116 ~ 13182157 (+)
G1517540 NA non-coding upstream 51982 13166237 ~ 13166465 (+)
G1517539 NA non-coding upstream 52571 13165654 ~ 13165876 (+)
G1517536 NA non-coding upstream 60281 13157733 ~ 13158166 (+)
G1518292 NA non-coding downstream 83932 13302593 ~ 13302811 (+)
G1518359 NA non-coding downstream 221899 13440560 ~ 13440830 (+)
G1518374 NA non-coding downstream 248619 13467280 ~ 13519064 (+)
G1518414 NA non-coding downstream 341162 13559823 ~ 13560040 (+)
G1517545 NA other upstream 30367 13187101 ~ 13188080 (+)
G1517457 NA other upstream 275953 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 282169 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 346284 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1277342 11940062 ~ 11941897 (+)
G1519096 NA other downstream 1216101 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1280125 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1337665 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1595321 14813982 ~ 14814886 (+)
il8r il8r other downstream 1679595 14898154 ~ 14901354 (+)

Expression


Co-expression Network