G1518292


Basic Information

Item Value
gene id G1518292
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13302593 ~ 13302811 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738100
GCGTTATCTTGAAGACAGAAAGAGATGCCTGCGCTAACTTTCTTATAAACGCTGTTGTTTCAGAGGTGCCTGTAAATCGCTGCTGCTGTACAGTCATTCATATCAGTAAGGTTGTCCAACGCAGCTCTCAAAAAAGACTACTAACCCTGTCCTATTCACATCACCCTGTTGGTAGACGATCAGTAAATTAAGATAAGATAGCCTTGGTTAGAACACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738100 True 219 lncRNA 0.42 1 13302593 13302811

Neighbor

gene id symbol gene type direction distance location
LOC118941099 LOC106574646 coding upstream 167750 13133117 ~ 13134843 (+)
LOC110495507 LOC106574647 coding upstream 170384 13102629 ~ 13132209 (+)
gp91phox cybb coding upstream 221774 13075064 ~ 13080819 (+)
cd3z cd3z coding upstream 403858 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 416962 12882511 ~ 12885631 (+)
LOC118941100 NA coding downstream 87218 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 147346 13450157 ~ 13451678 (+)
LOC110495498 LOC106574751 coding downstream 172263 13475074 ~ 13503268 (+)
LOC110495496 NA coding downstream 213531 13516342 ~ 13518076 (+)
trnaa-ugc-135 NA coding downstream 214151 13516962 ~ 13517036 (+)
G1517551 NA non-coding upstream 83932 13218447 ~ 13218661 (+)
G1517544 NA non-coding upstream 116514 13185844 ~ 13186079 (+)
G1517543 NA non-coding upstream 120436 13177116 ~ 13182157 (+)
G1517540 NA non-coding upstream 136128 13166237 ~ 13166465 (+)
G1517539 NA non-coding upstream 136717 13165654 ~ 13165876 (+)
G1518359 NA non-coding downstream 137749 13440560 ~ 13440830 (+)
G1518374 NA non-coding downstream 164469 13467280 ~ 13519064 (+)
G1518414 NA non-coding downstream 257012 13559823 ~ 13560040 (+)
G1518416 NA non-coding downstream 258786 13561597 ~ 13561803 (+)
G1517545 NA other upstream 114513 13187101 ~ 13188080 (+)
G1517457 NA other upstream 360099 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 366315 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 430430 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1361488 11940062 ~ 11941897 (+)
G1519096 NA other downstream 1131951 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1195975 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1253515 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1511171 14813982 ~ 14814886 (+)
il8r il8r other downstream 1595445 14898154 ~ 14901354 (+)

Expression


Co-expression Network