G1518427


Basic Information

Item Value
gene id G1518427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13578096 ~ 13578352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738275
GTTGAACCTGACCTGTGGGATTTCTATGCACCTGTTTCTATGACTTCTTACAGAGGAAGTTAGTGAAGCTTTCACTTAAGCGGGCTTTGGGTGCCAGTTTTTGACTAATGTTGTCAGTTATTGATGGCATTGTTCTAAGAACTACTTTGACTTTGTCAAATGTGTTCGTGGTGTTTTTTGCGACTTTGGTGACCTTGAGATACAGTATGACAACTCTAGAAACTCTAGCAGCTAACATTTCATAAATAAACGGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738275 True 257 lncRNA 0.39 1 13578096 13578352

Neighbor

gene id symbol gene type direction distance location
LOC110497006 LOC106574795 coding upstream 21744 13520158 ~ 13556352 (+)
LOC110495496 NA coding upstream 60020 13516342 ~ 13518076 (+)
trnaa-ugc-135 NA coding upstream 61060 13516962 ~ 13517036 (+)
LOC110495498 LOC106574751 coding upstream 74828 13475074 ~ 13503268 (+)
LOC118941043 NA coding upstream 126418 13450157 ~ 13451678 (+)
LOC110495495 LOC106574775 coding downstream 14628 13592980 ~ 13622818 (+)
LOC118941229 NA coding downstream 232884 13811236 ~ 13811288 (+)
LOC110495487 LOC106574771 coding downstream 305604 13883956 ~ 13969189 (+)
LOC110495485 LOC106575653 coding downstream 396758 13975110 ~ 13979887 (+)
LOC110495483 LOC106575569 coding downstream 508706 14087058 ~ 14485956 (+)
G1518422 NA non-coding upstream 9219 13568675 ~ 13568877 (+)
G1518416 NA non-coding upstream 16293 13561597 ~ 13561803 (+)
G1518414 NA non-coding upstream 18056 13559823 ~ 13560040 (+)
G1518374 NA non-coding upstream 59032 13467280 ~ 13519064 (+)
G1518434 NA non-coding downstream 9643 13587995 ~ 13588199 (+)
G1518453 NA non-coding downstream 58212 13636564 ~ 13636959 (+)
G1518478 NA non-coding downstream 99742 13678094 ~ 13719402 (+)
G1518491 LOC106574768 non-coding downstream 110689 13689041 ~ 13710674 (+)
G1518500 NA non-coding downstream 132414 13710766 ~ 13715402 (+)
G1517545 NA other upstream 390016 13187101 ~ 13188080 (+)
G1517457 NA other upstream 635602 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 641818 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 705933 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1636991 11940062 ~ 11941897 (+)
G1519096 NA other downstream 856410 14434762 ~ 14436120 (+)
G1519538 NA other downstream 920434 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 977974 14556326 ~ 14558589 (+)
G1519733 NA other downstream 1235630 14813982 ~ 14814886 (+)
il8r il8r other downstream 1319904 14898154 ~ 14901354 (+)

Expression


Co-expression Network