G1518453


Basic Information

Item Value
gene id G1518453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13636564 ~ 13636959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738301
tgcctgcgctccgctcgtgccgggcaaatgtgggagtggagcctaagggagaggtgcgtgtagtaggcactagatctcccgtgcttacccacagcccggttcaacctgtgcctgcactctggagggtccgggctagagtagttatccagcctggggaagtggtgccaaggctgcgcaccagagctccagtgctcccccacagcccggtccaccaggtgcctcctcctaacaccaagcctcctgaaggtctcccTGTCTCTATGTCTCCTCCCTACGGttctcccgcctgtccggcgctgccggagtctcccgcctgtccggcgctccCGGAGTCTGAGGCACCAGAGcttctgcccctctgtcccgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738301 True 369 lncRNA 0.65 2 13636564 13636959

Neighbor

gene id symbol gene type direction distance location
LOC110495495 LOC106574775 coding upstream 13746 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 80212 13520158 ~ 13556352 (+)
LOC110495496 NA coding upstream 118488 13516342 ~ 13518076 (+)
trnaa-ugc-135 NA coding upstream 119528 13516962 ~ 13517036 (+)
LOC110495498 LOC106574751 coding upstream 133296 13475074 ~ 13503268 (+)
LOC118941229 NA coding downstream 174277 13811236 ~ 13811288 (+)
LOC110495487 LOC106574771 coding downstream 246997 13883956 ~ 13969189 (+)
LOC110495485 LOC106575653 coding downstream 338151 13975110 ~ 13979887 (+)
LOC110495483 LOC106575569 coding downstream 450099 14087058 ~ 14485956 (+)
LOC110495481 LOC106574739 coding downstream 920017 14556326 ~ 14558589 (+)
G1518434 NA non-coding upstream 48365 13587995 ~ 13588199 (+)
G1518427 NA non-coding upstream 58212 13578096 ~ 13578352 (+)
G1518422 NA non-coding upstream 67687 13568675 ~ 13568877 (+)
G1518416 NA non-coding upstream 74761 13561597 ~ 13561803 (+)
G1518414 NA non-coding upstream 76524 13559823 ~ 13560040 (+)
G1518478 NA non-coding downstream 41135 13678094 ~ 13719402 (+)
G1518491 LOC106574768 non-coding downstream 52082 13689041 ~ 13710674 (+)
G1518500 NA non-coding downstream 73807 13710766 ~ 13715402 (+)
G1518505 NA non-coding downstream 159653 13796612 ~ 13799961 (+)
G1518557 LOC106575650 non-coding downstream 166422 13803381 ~ 13806693 (+)
G1517545 NA other upstream 448484 13187101 ~ 13188080 (+)
G1517457 NA other upstream 694070 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 700286 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 764401 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1695459 11940062 ~ 11941897 (+)
G1519096 NA other downstream 797803 14434762 ~ 14436120 (+)
G1519538 NA other downstream 861827 14498786 ~ 14499137 (+)
G1519733 NA other downstream 1177023 14813982 ~ 14814886 (+)
il8r il8r other downstream 1261297 14898154 ~ 14901354 (+)

Expression


Co-expression Network