G1518491 (LOC106574768)


Basic Information

Item Value
gene id G1518491
gene name LOC106574768
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13689041 ~ 13710674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738340
CTCCATGCTGTCCTACCCCATCCGATGGCCACGGTATAGGCTGTGAAGTGTGATGGGCTGGTGGCCAGGCTGTTTCTGATCATTAGGAAGACATGTGTGGCGTACAGCGTGTTCCAGGTGAACGTCCCCAACAGGAAGTACTGCAGCAGGACTGCCACTGCAGTACAGGGCCCTCTGtcccgctctgtgtgtgtgtcggacgGGGGGAGAATGTTGTCCTCCTGTATTTTAGGTTTGCCCAGCTGTTTATGAGGGTTGCTCACTCCCAACATGAAGAGGAGGGTGAAGATCAGGAGACACACGCAGACGCTCACTAAGAGGACCGTTGGGTTGGTTTTGCGTGATTTCCTGGGGACAGGTGATAGACAACACTATGTTAGGGAAGTTAGATGTGTAGCTATGGATGTGTTGGTTCATTAATAGTGGGTTTTATAATGGTTTCACCTATCAAGTCCTGTTGGATAAATGGGCTTCTTTACACCATTGAGAAGCACCCAATATTTTTTATTGGTTCTAGAACCCTGAGGGATCTTACCTGGTCCCCATCTGGAATGTTATTGTATATTTTTAATTGGTTCTGGAACCCTGTAGGATCTTACCTGGTCACCATCTGGAATGTTATTGTTAAACTCAACCCAATGATTGACATGGAACATCCCAATATGGTGAGCGCTCAGGGTATTTAAAATCCTTCCTGTACGACTGTAGAAAGAACATTAAAAATATGTTTCTGTCACAGTCATATAGAAAGTAATTGCCTCATGTGTCTGGATCCTGCTAATGATGTATAAGATATGTCAGAGTGTGGTCAGTAAAAGGGAGATGAAGGCAGCTAGCTATTCACCATCAGCACAGCAAAGTTAGTGGTGTGATTACAGAAACATCGCAGGCCGTCTGCTGAGTGGTTGACTTTGGAGCAGCCAAAGGTGCTCCAGTCTTTCAACGTGTAGTTCCATGACACGCAGGCAAAGTCATAGAGGGAGGTGTTGGGAACAGCCTGAGAAGTGAGAACAGACACAAACTCACTGTAAATCCTTCAGAAAAAGACATGCATTCACAGTATTccttataaaaataaatatataaaaag

Function

NR:

description
adhesion G-protein coupled receptor G7-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738340 True 1090 lncRNA 0.45 2 13689041 13710674

Neighbor

gene id symbol gene type direction distance location
LOC110495495 LOC106574775 coding upstream 66223 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 132689 13520158 ~ 13556352 (+)
LOC110495496 NA coding upstream 170965 13516342 ~ 13518076 (+)
trnaa-ugc-135 NA coding upstream 172005 13516962 ~ 13517036 (+)
LOC110495498 LOC106574751 coding upstream 185773 13475074 ~ 13503268 (+)
LOC118941229 NA coding downstream 100562 13811236 ~ 13811288 (+)
LOC110495487 LOC106574771 coding downstream 173282 13883956 ~ 13969189 (+)
LOC110495485 LOC106575653 coding downstream 264436 13975110 ~ 13979887 (+)
LOC110495483 LOC106575569 coding downstream 376384 14087058 ~ 14485956 (+)
LOC110495481 LOC106574739 coding downstream 846302 14556326 ~ 14558589 (+)
G1518453 NA non-coding upstream 52082 13636564 ~ 13636959 (+)
G1518434 NA non-coding upstream 100842 13587995 ~ 13588199 (+)
G1518427 NA non-coding upstream 110689 13578096 ~ 13578352 (+)
G1518422 NA non-coding upstream 120164 13568675 ~ 13568877 (+)
G1518416 NA non-coding upstream 127238 13561597 ~ 13561803 (+)
G1518500 NA non-coding downstream 92 13710766 ~ 13715402 (+)
G1518505 NA non-coding downstream 85938 13796612 ~ 13799961 (+)
G1518557 LOC106575650 non-coding downstream 92707 13803381 ~ 13806693 (+)
G1518613 NA non-coding downstream 258631 13969305 ~ 13969757 (+)
G1518614 NA non-coding downstream 259873 13970547 ~ 13970890 (+)
G1517545 NA other upstream 500961 13187101 ~ 13188080 (+)
G1517457 NA other upstream 746547 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 752763 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 816878 12833651 ~ 12872163 (+)
G1517150 NA other upstream 1747936 11940062 ~ 11941897 (+)
G1519096 NA other downstream 724088 14434762 ~ 14436120 (+)
G1519538 NA other downstream 788112 14498786 ~ 14499137 (+)
G1519733 NA other downstream 1103308 14813982 ~ 14814886 (+)
il8r il8r other downstream 1187582 14898154 ~ 14901354 (+)

Expression


Co-expression Network