G1518613


Basic Information

Item Value
gene id G1518613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13969305 ~ 13969757 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738485
GAATATGAATTGTGCAAGCTAATAATAGTTTTTTAAAAATGGGTAATTCTCACAGTATTCCATCACAGAATTTCACCACTGTGTAAATGATCCTCCAATTGCAAAGCACACACCTGTTTCGACAATGACAAATCATTTTGATGGGTCAGTCAGGTGATCAGAAAACCACACCTGCATGGTTCATTCTTTGCGGGAGATGCATATTATCTGTGAAGTTTTCTTATAAGTAGCCTCCAACCTGTTATATGAGGTACTCCAAATTCATGCCCGGGTGAGACAGATGGGTATCCAGATAGGTTTGGATTTGTTCCCAGCCCGTGTGGTGGTGGAAGGGAATGAGGAAGTAGATGTGCTGGCTAAACAGGCCcttaggagagaggaggtggatgtGGAGATGCCGATTAGCAAGGAAGAGGTTTAAGGGAGTAATAAGGACAGTCGTGGTGCAGAGAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107721237

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738485 True 453 lncRNA 0.43 1 13969305 13969757

Neighbor

gene id symbol gene type direction distance location
LOC110495487 LOC106574771 coding upstream 116 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 158017 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 346487 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 412953 13520158 ~ 13556352 (+)
LOC110495496 NA coding upstream 451229 13516342 ~ 13518076 (+)
LOC110495485 LOC106575653 coding downstream 5353 13975110 ~ 13979887 (+)
LOC110495483 LOC106575569 coding downstream 117301 14087058 ~ 14485956 (+)
LOC110495481 LOC106574739 coding downstream 587219 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 618894 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 783679 14753436 ~ 14764586 (+)
G1518557 LOC106575650 non-coding upstream 162612 13803381 ~ 13806693 (+)
G1518505 NA non-coding upstream 169344 13796612 ~ 13799961 (+)
G1518478 NA non-coding upstream 249903 13678094 ~ 13719402 (+)
G1518500 NA non-coding upstream 253903 13710766 ~ 13715402 (+)
G1518491 LOC106574768 non-coding upstream 258631 13689041 ~ 13710674 (+)
G1518614 NA non-coding downstream 790 13970547 ~ 13970890 (+)
G1518612 NA non-coding downstream 1831 13971588 ~ 13972418 (+)
G1518993 NA non-coding downstream 3003 13972760 ~ 13972963 (+)
G1519100 NA non-coding downstream 131008 14100765 ~ 14104118 (+)
G1519138 NA non-coding downstream 205842 14175599 ~ 14175914 (+)
G1517545 NA other upstream 781225 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1026811 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1033027 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1097142 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2028200 11940062 ~ 11941897 (+)
G1519096 NA other downstream 465005 14434762 ~ 14436120 (+)
G1519538 NA other downstream 529029 14498786 ~ 14499137 (+)
G1519733 NA other downstream 844225 14813982 ~ 14814886 (+)
il8r il8r other downstream 928499 14898154 ~ 14901354 (+)

Expression


Co-expression Network