G1518612


Basic Information

Item Value
gene id G1518612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13971588 ~ 13972418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738484
aactctccttccgtggcctccaactgctcttaaacgcaagtaaaactaaatgcatgcccttcaaccgatctctgcccgcccgtccagcatcactatcACTACTGGacgattctgacttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagactcacatcaagcatctacaatccaaaattaaatctagaattggctttccaattttgcaacaaagcatccttcactcatgctgccaaacatacccccgtaaaccctaccgatcctcgacttcggcgatgtcatttacaaaatagcctccagcactctacttaacaaattggatgcagtctatcacagtgccatccgttttgtcaccaaagccccatatactatccaAAACTGcggcctgtatgctctcgttggctggccctcgcttcatactcgtcgccaaacccactggctccaggtcatctacaagtctttgctaggtaaagcaccgccttatctcagctcactggtcaccatagcagcacccacccgtagcacacgctccagcaggtatatttcgcTGGTTACCCCCAAAGCCAAATCCTACAttagccgcctttccttccacttctctgctgccaatgactgtaacgaactgcaaaaatcactgaagctggagactcatatctctctcactaactttaagcaccagctgtaagagcagctcacagatcacttcacctgtacatagcccatctgtaaatagtccatccaactttaattgctatattgtaattacttcgccactttggcctatttattgccttaactccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738484 True 831 lncRNA 0.46 1 13971588 13972418

Neighbor

gene id symbol gene type direction distance location
LOC110495487 LOC106574771 coding upstream 2399 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 160300 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 348770 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 415236 13520158 ~ 13556352 (+)
trnaa-ugc-135 NA coding upstream 454552 13516962 ~ 13517036 (+)
LOC110495485 LOC106575653 coding downstream 2692 13975110 ~ 13979887 (+)
LOC110495483 LOC106575569 coding downstream 114640 14087058 ~ 14485956 (+)
LOC110495481 LOC106574739 coding downstream 584558 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 616233 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 781018 14753436 ~ 14764586 (+)
G1518614 NA non-coding upstream 698 13970547 ~ 13970890 (+)
G1518613 NA non-coding upstream 1831 13969305 ~ 13969757 (+)
G1518557 LOC106575650 non-coding upstream 164895 13803381 ~ 13806693 (+)
G1518505 NA non-coding upstream 171627 13796612 ~ 13799961 (+)
G1518500 NA non-coding upstream 256186 13710766 ~ 13715402 (+)
G1518993 NA non-coding downstream 342 13972760 ~ 13972963 (+)
G1519100 NA non-coding downstream 128347 14100765 ~ 14104118 (+)
G1519138 NA non-coding downstream 203181 14175599 ~ 14175914 (+)
G1519139 NA non-coding downstream 203539 14175957 ~ 14176276 (+)
G1519141 NA non-coding downstream 205570 14177988 ~ 14178201 (+)
G1517545 NA other upstream 783508 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1029094 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1035310 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1099425 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2030483 11940062 ~ 11941897 (+)
G1519096 NA other downstream 462344 14434762 ~ 14436120 (+)
G1519538 NA other downstream 526368 14498786 ~ 14499137 (+)
G1519733 NA other downstream 841564 14813982 ~ 14814886 (+)
il8r il8r other downstream 925838 14898154 ~ 14901354 (+)

Expression


Co-expression Network