G1519139


Basic Information

Item Value
gene id G1519139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14175957 ~ 14176276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739131
agctgtgttgcttttacgccaaacataacgtttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttctacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctcct

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739131 True 320 lncRNA 0.43 1 14175957 14176276

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 196070 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 206768 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 364669 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 553139 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 619605 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 380700 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 412375 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 577160 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 602814 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 616661 14792937 ~ 14799311 (+)
G1519138 NA non-coding upstream 43 14175599 ~ 14175914 (+)
G1519100 NA non-coding upstream 71839 14100765 ~ 14104118 (+)
G1518993 NA non-coding upstream 202994 13972760 ~ 13972963 (+)
G1518612 NA non-coding upstream 203539 13971588 ~ 13972418 (+)
G1518614 NA non-coding upstream 205067 13970547 ~ 13970890 (+)
G1519141 NA non-coding downstream 1712 14177988 ~ 14178201 (+)
G1519142 NA non-coding downstream 3682 14179958 ~ 14180180 (+)
G1519143 NA non-coding downstream 4336 14180612 ~ 14180852 (+)
G1519147 NA non-coding downstream 8716 14184992 ~ 14185212 (+)
G1519148 NA non-coding downstream 8987 14185263 ~ 14187778 (+)
G1517545 NA other upstream 987877 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1233463 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1239679 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1303794 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2234852 11940062 ~ 11941897 (+)
G1519096 NA other downstream 258486 14434762 ~ 14436120 (+)
G1519538 NA other downstream 322510 14498786 ~ 14499137 (+)
G1519733 NA other downstream 637706 14813982 ~ 14814886 (+)
il8r il8r other downstream 721980 14898154 ~ 14901354 (+)

Expression


Co-expression Network