G1519148


Basic Information

Item Value
gene id G1519148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14185263 ~ 14187778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739140
GCGCTGCACAATAGCTGATGCCCACTTGGTGCTGGATGTTGTTGGATGCTAGCGGACATCAGAGGGGCCCAGCACCGTAGACAAATGACTGTATTAAGAGAGAGGTGTAGATGGGCCTTGATTAGATTGATCTATACACTGGAATGATCAATGTTCAATTTGATGCTACCTGACCTGAGAAGTTCATCAATCCCCATGACCTTTACAAGGTTAATTCCTTTCCTGTTCTTTCTCCTCAACGTTTCACTCTGTTAAACAAAATGGCTCATTCACTATCTTAAGCAAATGCCACACAGCGGAATGTAAACGGTATACATATGGTGTAATAACTGATAAACTGATAGGTGTGTAGAGTAGGTCTGTAGGGATGCCACaggataggtgacaggataggCGACAGGATAGCTAATAAgataggtgacaggataggtgacaagataggtgacaggataggtaacaagataggtaacaggataggtaacaggataggtgacaggataggtgacaggataggtatagggataggtgacaggataggtgacaggataggtAACAGGATAGGTGACAAGATAGGTAACAGGATAGGTGACAAGATAGGTAACAGGATAGGTGACAAGATAGGTAACAGGATAGGTAAAAGGATAGGTGACAAgataggtgacaggataggtgacaggataggtGACAAGATAGGACTTCATTCATAAGACAGTGACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTACATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTGACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTACATTCATAAGACAGTAACAGTGTAGGACTACATTCATAAGACAGTAACAGTGTAGGACTTCATTCACAAGACAGTAACAGTGTAGGACTACATTCATAAGACAGTAACAGTGTAGGACTACATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTACATTCATAAGACATTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTTCATTCATAAGACAGTAACAGTGTAGGACTACATTCATAAGACAGTAACAGTGTAGGACTTCATACATAAGACAGTAACAGTGTAGGACTTCATACATAAGACAGTAGTTGACACTTAGTTTCCTGTAGTAAATGGTGGTGGAGAGTTACTACATTTACAATGACCTGTCTTAGACCTGTCATGGAAAACAAGTGTCCTCTATGTCCTCTATGTCATGGTTAGAATGACAATTTCC

Function

NR:

description
adhesive plaque matrix protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739140 True 1503 lncRNA 0.40 4 14185263 14187778

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 205376 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 216074 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 373975 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 562445 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 628911 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 369198 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 400873 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 565658 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 591312 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 605159 14792937 ~ 14799311 (+)
G1519147 NA non-coding upstream 51 14184992 ~ 14185212 (+)
G1519143 NA non-coding upstream 4411 14180612 ~ 14180852 (+)
G1519142 NA non-coding upstream 5083 14179958 ~ 14180180 (+)
G1519141 NA non-coding upstream 7062 14177988 ~ 14178201 (+)
G1519139 NA non-coding upstream 8987 14175957 ~ 14176276 (+)
G1519150 NA non-coding downstream 548 14188326 ~ 14188768 (+)
G1519149 NA non-coding downstream 1967 14189745 ~ 14190470 (+)
G1519151 NA non-coding downstream 5581 14193359 ~ 14193611 (+)
G1519159 NA non-coding downstream 14451 14202229 ~ 14202611 (+)
G1519161 NA non-coding downstream 17447 14205225 ~ 14205434 (+)
G1517545 NA other upstream 997183 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1242769 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1248985 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1313100 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2244158 11940062 ~ 11941897 (+)
G1519096 NA other downstream 246984 14434762 ~ 14436120 (+)
G1519538 NA other downstream 311008 14498786 ~ 14499137 (+)
G1519733 NA other downstream 626204 14813982 ~ 14814886 (+)
il8r il8r other downstream 710478 14898154 ~ 14901354 (+)

Expression


Co-expression Network