G1519235


Basic Information

Item Value
gene id G1519235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14333178 ~ 14333400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739236
ATTGAAAAGACGACTATGCCCGACAGTCTACGTTCAGTTTTGAAagttgaaaatacatatttttcatgTCATTTAGGTTTGGATGGAACTTCAAATTTTTTCAATGTACTTGCAGGCTATACATATAGACGCAGTATAGAAAATTGGTCTATGAACAATTTGTATTAACAATCGTACATCACTTCAGTATTTACACACAGTATTTATTTACATCATTCACGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739236 True 223 lncRNA 0.32 1 14333178 14333400

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 353291 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 363989 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 521890 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 710360 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 776826 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 223576 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 255251 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 420036 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 445690 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 459537 14792937 ~ 14799311 (+)
G1519234 NA non-coding upstream 2402 14330253 ~ 14330776 (+)
G1519233 NA non-coding upstream 2999 14329950 ~ 14330179 (+)
G1519232 NA non-coding upstream 3470 14329422 ~ 14329708 (+)
G1519231 NA non-coding upstream 4953 14327964 ~ 14328225 (+)
G1519229 NA non-coding upstream 6511 14326411 ~ 14326667 (+)
G1519236 NA non-coding downstream 312 14333712 ~ 14333915 (+)
G1519238 NA non-coding downstream 1570 14334970 ~ 14335245 (+)
G1519245 NA non-coding downstream 16855 14350255 ~ 14350468 (+)
G1519247 NA non-coding downstream 18485 14351885 ~ 14352088 (+)
G1519249 NA non-coding downstream 22313 14355713 ~ 14355928 (+)
G1517545 NA other upstream 1145098 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1390684 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1396900 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1461015 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2392073 11940062 ~ 11941897 (+)
G1519096 NA other downstream 101362 14434762 ~ 14436120 (+)
G1519538 NA other downstream 165386 14498786 ~ 14499137 (+)
G1519733 NA other downstream 480582 14813982 ~ 14814886 (+)
il8r il8r other downstream 564856 14898154 ~ 14901354 (+)

Expression


Co-expression Network