G1519272


Basic Information

Item Value
gene id G1519272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14399749 ~ 14400370 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739275
gttagagatgcaggtgtcatttggttagctagcaagatcTTGAATGACTGTTATTGTAGGTGAAAATTCATGACTATGGTTGATTTTCCAGTATCTAGACTGTTCTCCCAAAAGTATTGAGACAGAAAACATAGGGTTAATTAATAGACATGCAGAAGCAGAGTAAAGGTTGAATTCAGGTGAATGGACAGAGCAGAATCCAtgggagtgtacagactgggtcaacatGGAGTTAATCACTAGACATGTaaaacagaacagaagcagaatccatgggagtgtacagactgggtcaacatGGAGTTAATCACTAGACATGTaaaacagaacagaagcagaatccatgggagtgtacagactgggtcaacatGGAGTTAATCACTAGACATgtaaaacagaacggaagcagaatccatgggagtgtacagactgggtcaacatGGAGTTAATCACTAGACATGTAAAGCAGAACAGAAGCAGAATCCAtgggagtgtacagactgggtcaacatGGAGTTAATCACTAGACATgtaaaacagaacggaagcagaatccatgggagtgtacagactgggtcaacatGGAGTTAATCACTAGACATGTAAAGCAGAACAGAAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739275 True 622 lncRNA 0.41 1 14399749 14400370

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 419862 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 430560 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 588461 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 776931 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 843397 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 156606 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 188281 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 353066 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 378720 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 392567 14792937 ~ 14799311 (+)
G1519271 NA non-coding upstream 430 14399051 ~ 14399319 (+)
G1519249 NA non-coding upstream 43821 14355713 ~ 14355928 (+)
G1519247 NA non-coding upstream 47661 14351885 ~ 14352088 (+)
G1519245 NA non-coding upstream 49281 14350255 ~ 14350468 (+)
G1519238 NA non-coding upstream 64504 14334970 ~ 14335245 (+)
G1519277 NA non-coding downstream 12436 14412806 ~ 14413014 (+)
G1519278 NA non-coding downstream 12695 14413065 ~ 14413329 (+)
G1519279 NA non-coding downstream 13335 14413705 ~ 14413940 (+)
G1519280 NA non-coding downstream 13898 14414268 ~ 14414470 (+)
G1519282 NA non-coding downstream 16411 14416781 ~ 14417037 (+)
G1517545 NA other upstream 1211669 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1457255 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1463471 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1527586 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2458644 11940062 ~ 11941897 (+)
G1519096 NA other downstream 34392 14434762 ~ 14436120 (+)
G1519538 NA other downstream 98416 14498786 ~ 14499137 (+)
G1519733 NA other downstream 413612 14813982 ~ 14814886 (+)
il8r il8r other downstream 497886 14898154 ~ 14901354 (+)

Expression


Co-expression Network