G1519282


Basic Information

Item Value
gene id G1519282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14416781 ~ 14417037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739285
AAACAAATTGTGTTGCCATGACTAATTATAgctacaccaaacacacacacacaagctagccCTGCTGCTCAgcctgcagtctctctctctctctctctctctctctctcgctctctctctttctctctctctctctttctctctctctctctctctctctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctctctctctctccctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739285 True 257 lncRNA 0.49 1 14416781 14417037

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 436894 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 447592 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 605493 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 793963 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 860429 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 139939 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 171614 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 336399 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 362053 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 375900 14792937 ~ 14799311 (+)
G1519280 NA non-coding upstream 2311 14414268 ~ 14414470 (+)
G1519279 NA non-coding upstream 2841 14413705 ~ 14413940 (+)
G1519278 NA non-coding upstream 3452 14413065 ~ 14413329 (+)
G1519277 NA non-coding upstream 3767 14412806 ~ 14413014 (+)
G1519272 NA non-coding upstream 16411 14399749 ~ 14400370 (+)
G1519286 NA non-coding downstream 26573 14443610 ~ 14443860 (+)
G1519296 NA non-coding downstream 42171 14459208 ~ 14459452 (+)
G1519300 NA non-coding downstream 48307 14465344 ~ 14472844 (+)
G1519303 NA non-coding downstream 70455 14487492 ~ 14487872 (+)
G1519095 NA non-coding downstream 73425 14490462 ~ 14492116 (+)
G1517545 NA other upstream 1228701 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1474287 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1480503 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1544618 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2475676 11940062 ~ 11941897 (+)
G1519096 NA other downstream 17725 14434762 ~ 14436120 (+)
G1519538 NA other downstream 81749 14498786 ~ 14499137 (+)
G1519733 NA other downstream 396945 14813982 ~ 14814886 (+)
il8r il8r other downstream 481219 14898154 ~ 14901354 (+)

Expression


Co-expression Network