G1519537


Basic Information

Item Value
gene id G1519537
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14498268 ~ 14498607 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739572
ggacatcccttcaaattagtggattcggctatttcagccacacccgttgctgagaggtgtataaaatcgagcacacacccatgcaatctccattgacaaacattggcagtagaatggccttactaaagagctcagtgactttcaatatggcaccgtcataggatgccacctttccaacaagtcatttcgtcaaatttctgcccttctagatctgccccggtcaactgtaagtgctgttattgtgaagtggaaacatctaagagcaacaacggcaaaaatgcctctggaagcaacatcagcataagaactgtttgccaagcagccacacacaagcctaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739572 True 340 lncRNA 0.45 1 14498268 14498607

Neighbor

gene id symbol gene type direction distance location
LOC110495483 LOC106575569 coding upstream 12312 14087058 ~ 14485956 (+)
LOC110495485 LOC106575653 coding upstream 518381 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 529079 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 686980 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 875450 13592980 ~ 13622818 (+)
LOC110495481 LOC106574739 coding downstream 58369 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 90044 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 254829 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 280483 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 294330 14792937 ~ 14799311 (+)
G1519534 NA non-coding upstream 2552 14495510 ~ 14495716 (+)
G1519304 NA non-coding upstream 4187 14493879 ~ 14494081 (+)
G1519095 NA non-coding upstream 6152 14490462 ~ 14492116 (+)
G1519303 NA non-coding upstream 10396 14487492 ~ 14487872 (+)
G1519300 NA non-coding upstream 25424 14465344 ~ 14472844 (+)
G1519555 NA non-coding downstream 14425 14513032 ~ 14513428 (+)
G1519561 NA non-coding downstream 28131 14526738 ~ 14527008 (+)
G1519562 NA non-coding downstream 28971 14527578 ~ 14527792 (+)
G1519578 NA non-coding downstream 30482 14529089 ~ 14529710 (+)
G1519579 NA non-coding downstream 31466 14530073 ~ 14531837 (+)
G1519096 NA other upstream 62148 14434762 ~ 14436120 (+)
G1517545 NA other upstream 1310188 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1555774 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1561990 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1626105 12833651 ~ 12872163 (+)
G1519538 NA other downstream 179 14498786 ~ 14499137 (+)
G1519733 NA other downstream 315375 14813982 ~ 14814886 (+)
il8r il8r other downstream 399649 14898154 ~ 14901354 (+)
LOC110495440 LOC106575601 other downstream 710362 15207355 ~ 15251952 (+)

Expression


Co-expression Network