G1519780


Basic Information

Item Value
gene id G1519780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14966407 ~ 14966635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739912
gttgagtcatgatgtgtgtgtgatagCACCTGATCTCGGTCTGCTCCGCTGAACACATGCTAATGTGGTCTACCCCTGCACAGACAAAACCTGCAGTAGCCCCTGCTATagccaccctacagcaccacTCACAGCCTGCCACTGGCTGTCACGCCTGTCAATCAATCATCCCAACATATCAGTGCATTCGTCAGGCTTGTCAACAGTAGCGGTTGCCCGCAATGCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739912 True 229 lncRNA 0.54 1 14966407 14966635

Neighbor

gene id symbol gene type direction distance location
il8r il8r coding upstream 65053 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 85540 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 104563 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 123522 14835394 ~ 14842885 (+)
zgc:92380 LOC106575639 coding upstream 167096 14792937 ~ 14799311 (+)
LOC110495435 LOC100194500 coding downstream 209766 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 240720 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 289614 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 309938 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 366750 15333385 ~ 15344802 (+)
G1519776 NA non-coding upstream 7904 14958079 ~ 14958503 (+)
G1519773 NA non-coding upstream 18892 14947039 ~ 14947515 (+)
G1519772 NA non-coding upstream 21117 14944518 ~ 14945290 (+)
G1519770 NA non-coding upstream 24287 14941895 ~ 14942120 (+)
G1519766 NA non-coding upstream 35369 14930827 ~ 14931038 (+)
G1519782 NA non-coding downstream 4820 14971455 ~ 14971724 (+)
G1519783 NA non-coding downstream 5373 14972008 ~ 14972296 (+)
G1519784 NA non-coding downstream 5758 14972393 ~ 14972734 (+)
G1519785 NA non-coding downstream 10463 14977098 ~ 14977673 (+)
G1519789 NA non-coding downstream 12653 14979288 ~ 14991274 (+)
G1519733 NA other upstream 151521 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 409061 14556326 ~ 14558589 (+)
G1519538 NA other upstream 467270 14498786 ~ 14499137 (+)
G1519096 NA other upstream 530287 14434762 ~ 14436120 (+)
G1520649 NA other downstream 789858 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 829717 15796262 ~ 15801788 (+)
G1520742 NA other downstream 952522 15919157 ~ 15922899 (+)
G1520748 NA other downstream 971595 15938230 ~ 15938818 (+)

Expression


Co-expression Network