G1519783


Basic Information

Item Value
gene id G1519783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14972008 ~ 14972296 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739915
ctcttaacgttatgttttacagactattatgtcaaacaatatggcatctacagtccaaggtctcttaaccctatgttttacagactattatgtcaaacaatatggcatctacagtccaaggtctcttaaccctatgttttacagactattatgtcaaacaatatggcatctacagtccaaggtctcttaacgttatgttttacagactattatgtcaaacaatatggcatctacagaccaaggtctcttaaccctatgttttacagactattatgtcaaacaatatggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739915 True 289 lncRNA 0.35 1 14972008 14972296

Neighbor

gene id symbol gene type direction distance location
il8r il8r coding upstream 70654 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 91141 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 110164 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 129123 14835394 ~ 14842885 (+)
zgc:92380 LOC106575639 coding upstream 172697 14792937 ~ 14799311 (+)
LOC110495435 LOC100194500 coding downstream 204105 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 235059 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 283953 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 304277 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 361089 15333385 ~ 15344802 (+)
G1519782 NA non-coding upstream 284 14971455 ~ 14971724 (+)
G1519780 NA non-coding upstream 5373 14966407 ~ 14966635 (+)
G1519776 NA non-coding upstream 13505 14958079 ~ 14958503 (+)
G1519773 NA non-coding upstream 24493 14947039 ~ 14947515 (+)
G1519772 NA non-coding upstream 26718 14944518 ~ 14945290 (+)
G1519784 NA non-coding downstream 97 14972393 ~ 14972734 (+)
G1519785 NA non-coding downstream 4802 14977098 ~ 14977673 (+)
G1519789 NA non-coding downstream 6992 14979288 ~ 14991274 (+)
G1519820 NA non-coding downstream 73025 15045321 ~ 15047476 (+)
G1519836 NA non-coding downstream 120716 15093012 ~ 15115567 (+)
G1519733 NA other upstream 157122 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 414662 14556326 ~ 14558589 (+)
G1519538 NA other upstream 472871 14498786 ~ 14499137 (+)
G1519096 NA other upstream 535888 14434762 ~ 14436120 (+)
G1520649 NA other downstream 784197 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 824056 15796262 ~ 15801788 (+)
G1520742 NA other downstream 946861 15919157 ~ 15922899 (+)
G1520748 NA other downstream 965934 15938230 ~ 15938818 (+)

Expression


Co-expression Network