G1519820


Basic Information

Item Value
gene id G1519820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15045321 ~ 15047476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739967
gcggagggagagcggaggtgttttgtgactggtctggaggagagttGAGCGGGCGGAGGGAGAGCGAaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggtggtgttttgtgactggtctggaggagagttGAGCGGGCGGAGGGAGAGCGAaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggtggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggtggtgttttgtgactggtctggaggagagttgagctcgagagggagagcgatggtgttttgtgactggtctggaggagagttGAGCGGGCGGAGGGAGAGCGAATgtgttttgtgactggtctggaggagagttgagctggcggagggagagcggaggtgttttgtgactggtctggaggagagttgagctcgagagggagagtggaggtgttttgtgactggtctggaggagagttgagctcgagagggagagtggaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggtggctggcggagggagagcggtggctggcggagggagagcgtaggtgttttgtgactggtctagaggagagttgagctggcggagggagatcggaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggtggtgttttgtgactggtctggaggagagttgagctcgcagagggagagtggaggtgttttgtgactggtctagaggagagttgagctggtgaagggagagtggaggtgttttgtgactggtctagaggagagttgagctggcggagggagagcggaggtgttttgtgactggtctagaggagagttgagctggcggagggagagtggaggtgttttgtgactggtctggaggagagttgacctggcggagggagagcggtggctggcggagggagagcggtggtgttttgtgactggtctagaggagagttgagctggcggagggagagcggtggtgttttgtgactggtctagaggagagttgagctggcggagggagagcggaggtgttttgtgactggtctggaggagagttgagctggcggagggagagcggtggctggcggagggagagcggTGGCTGGCGGCGGGAGAGCGGTggtgttttgtgactggtctagaggagagttgagctggcggagggagagaggtggtgttttgtgactggtctagaggagagttgagctggcggagggagagcggtggtgttttgtgactggtctagaggagagttgagctggcggagggagagcggaggtgttttgtgacttgtctagaggagagttgagctggcggagggagagcggaggtgttttgtgacttgtctagaggagagttgagctggcggagggagagcggaggtgttttgtgacttgtctagaggagagttgagctggcggagggagagcggtggctgtgttttgtgactggtctagaggagagttgatctggcggagggagagcggaggtgttttgtgacttgtctagaggagagttgagctggcggagggagagcggaggtgttttgtgacttgtctagaggagagttgagctggcggagggagagcggtggctgtgttttgtgactggtctagaggagagttgagctggcggagggagagcggTGGCTGTGtttgtgactggtctagaggagagttgaTCTGGCGGAGGGAGAGTGGTGGCTGTGGTTGTGTTTCATCTTTACTGTAACCTGTGGCTGACAGGATGGACAGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739967 True 1948 lncRNA 0.58 2 15045321 15047476

Neighbor

gene id symbol gene type direction distance location
il8r il8r coding upstream 143967 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 164454 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 183477 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 202436 14835394 ~ 14842885 (+)
zgc:92380 LOC106575639 coding upstream 246010 14792937 ~ 14799311 (+)
LOC110495435 LOC100194500 coding downstream 128925 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 159879 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 208773 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 229097 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 285909 15333385 ~ 15344802 (+)
G1519789 NA non-coding upstream 54047 14979288 ~ 14991274 (+)
G1519785 NA non-coding upstream 67648 14977098 ~ 14977673 (+)
G1519784 NA non-coding upstream 72587 14972393 ~ 14972734 (+)
G1519783 NA non-coding upstream 73025 14972008 ~ 14972296 (+)
G1519782 NA non-coding upstream 73597 14971455 ~ 14971724 (+)
G1519836 NA non-coding downstream 45536 15093012 ~ 15115567 (+)
G1519859 NA non-coding downstream 92534 15140010 ~ 15140233 (+)
G1519863 NA non-coding downstream 100314 15147790 ~ 15148181 (+)
G1519878 NA non-coding downstream 106834 15154310 ~ 15154547 (+)
G1519888 NA non-coding downstream 123886 15171362 ~ 15171586 (+)
G1519733 NA other upstream 230435 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 487975 14556326 ~ 14558589 (+)
G1519538 NA other upstream 546184 14498786 ~ 14499137 (+)
G1519096 NA other upstream 609201 14434762 ~ 14436120 (+)
G1520649 NA other downstream 709017 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 748876 15796262 ~ 15801788 (+)
G1520742 NA other downstream 871681 15919157 ~ 15922899 (+)
G1520748 NA other downstream 890754 15938230 ~ 15938818 (+)

Expression


Co-expression Network