G1519888


Basic Information

Item Value
gene id G1519888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15171362 ~ 15171586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740044
GTCCATGTCTGTCAGAACAGCACCTCCATAGCCTCTAGCTTCAGTCCATGTCTATCAGAACAGCACCTCTATAGCCCCTAGCCTCAGTCCATGTCTGTCAGAACAGTACCTCCATAGCCTCTAGCTTCAGTCCAtgtctatcagaataacacctcCATAGCCACCTAGCTTCAGTCCATGTCTGTCAGAACAGCACCTCCATAGCGCCTAGCCTCAGTCCAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740044 True 225 lncRNA 0.51 1 15171362 15171586

Neighbor

gene id symbol gene type direction distance location
LOC110495438 tns1 coding upstream 38028 14907954 ~ 15133334 (+)
il8r il8r coding upstream 270008 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 290495 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 309518 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 328477 14835394 ~ 14842885 (+)
LOC110495435 LOC100194500 coding downstream 4815 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 35769 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 84663 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 104987 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 161799 15333385 ~ 15344802 (+)
G1519878 NA non-coding upstream 16815 15154310 ~ 15154547 (+)
G1519863 NA non-coding upstream 23181 15147790 ~ 15148181 (+)
G1519859 NA non-coding upstream 31129 15140010 ~ 15140233 (+)
G1519836 NA non-coding upstream 55795 15093012 ~ 15115567 (+)
G1519820 NA non-coding upstream 123886 15045321 ~ 15047476 (+)
G1519889 NA non-coding downstream 370 15171956 ~ 15172188 (+)
G1519892 NA non-coding downstream 3045 15174631 ~ 15174852 (+)
G1519873 LOC106575565 non-coding downstream 15245 15186831 ~ 15191130 (+)
G1519904 NA non-coding downstream 52378 15223964 ~ 15224303 (+)
G1519915 NA non-coding downstream 77449 15249035 ~ 15249599 (+)
G1519733 NA other upstream 356476 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 614016 14556326 ~ 14558589 (+)
G1519538 NA other upstream 672225 14498786 ~ 14499137 (+)
G1519096 NA other upstream 735242 14434762 ~ 14436120 (+)
G1520649 NA other downstream 584907 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 624766 15796262 ~ 15801788 (+)
G1520742 NA other downstream 747571 15919157 ~ 15922899 (+)
G1520748 NA other downstream 766644 15938230 ~ 15938818 (+)

Expression


Co-expression Network