G1519889


Basic Information

Item Value
gene id G1519889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15171956 ~ 15172188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740045
ACTTTCGAACAGGTGCCTTCCCCACAGTCCAAATGCTTCATCTACCATACTGTGTCATGCTTGTATGAGGAACATCAACATTTTGACCAGCCAGGACCACCGGTGCAGAAGAGACCATCAATGGGTCTTGCTTGGTTCAACAAACATTAGAACATCTACACCAGTTTGACAGAATCTGAAATGGAATGCCAAGGGGTGTTTTGTGGGCTCAATCTATACGTGTAATACTATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740045 True 233 lncRNA 0.44 1 15171956 15172188

Neighbor

gene id symbol gene type direction distance location
LOC110495438 tns1 coding upstream 38622 14907954 ~ 15133334 (+)
il8r il8r coding upstream 270602 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 291089 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 310112 14858722 ~ 14861844 (+)
LOC110495453 il8r coding upstream 329071 14835394 ~ 14842885 (+)
LOC110495435 LOC100194500 coding downstream 4213 15176401 ~ 15186345 (+)
LOC110495440 LOC106575601 coding downstream 35167 15207355 ~ 15251952 (+)
LOC110495444 LOC106575602 coding downstream 84061 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 104385 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 161197 15333385 ~ 15344802 (+)
G1519888 NA non-coding upstream 370 15171362 ~ 15171586 (+)
G1519878 NA non-coding upstream 17409 15154310 ~ 15154547 (+)
G1519863 NA non-coding upstream 23775 15147790 ~ 15148181 (+)
G1519859 NA non-coding upstream 31723 15140010 ~ 15140233 (+)
G1519836 NA non-coding upstream 56389 15093012 ~ 15115567 (+)
G1519892 NA non-coding downstream 2443 15174631 ~ 15174852 (+)
G1519873 LOC106575565 non-coding downstream 14643 15186831 ~ 15191130 (+)
G1519904 NA non-coding downstream 51776 15223964 ~ 15224303 (+)
G1519915 NA non-coding downstream 76847 15249035 ~ 15249599 (+)
G1519916 NA non-coding downstream 77469 15249657 ~ 15249945 (+)
G1519733 NA other upstream 357070 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 614610 14556326 ~ 14558589 (+)
G1519538 NA other upstream 672819 14498786 ~ 14499137 (+)
G1519096 NA other upstream 735836 14434762 ~ 14436120 (+)
G1520649 NA other downstream 584305 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 624164 15796262 ~ 15801788 (+)
G1520742 NA other downstream 746969 15919157 ~ 15922899 (+)
G1520748 NA other downstream 766042 15938230 ~ 15938818 (+)

Expression


Co-expression Network