G1519904


Basic Information

Item Value
gene id G1519904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15223964 ~ 15224303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740061
actgaccaaggtccttctcccccgattgctcagtttggccgggtggccagctctaggaagagtcttggtggttccaaacttcttccatttaaggaaaatggaggcctctgtgttcttggggaccttcaatgctacagaaatgttatggtaccctttcccagatctgtgccttaacacaatcctgtctcggagctctacagacaattccttcgacctcatggcttggtttttgctctgacatgcactgtcaactgtgggaccttatatcaattgaatttaccacaggtggactccaatcaagttgtagaaacatctcaatgatgatcaatggaaagaaaCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740061 True 340 lncRNA 0.46 1 15223964 15224303

Neighbor

gene id symbol gene type direction distance location
LOC110495435 LOC100194500 coding upstream 37619 15176401 ~ 15186345 (+)
LOC110495438 tns1 coding upstream 90630 14907954 ~ 15133334 (+)
il8r il8r coding upstream 322610 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 343097 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 362120 14858722 ~ 14861844 (+)
LOC110495444 LOC106575602 coding downstream 31946 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 52270 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 109082 15333385 ~ 15344802 (+)
LOC110495439 LOC106574706 coding downstream 194758 15419061 ~ 15490199 (+)
LOC110495446 LOC106575524 coding downstream 278711 15503014 ~ 15536810 (+)
G1519873 LOC106575565 non-coding upstream 32834 15186831 ~ 15191130 (+)
G1519892 NA non-coding upstream 49112 15174631 ~ 15174852 (+)
G1519889 NA non-coding upstream 51776 15171956 ~ 15172188 (+)
G1519888 NA non-coding upstream 52378 15171362 ~ 15171586 (+)
G1519878 NA non-coding upstream 69417 15154310 ~ 15154547 (+)
G1519915 NA non-coding downstream 24732 15249035 ~ 15249599 (+)
G1519916 NA non-coding downstream 25354 15249657 ~ 15249945 (+)
G1519917 NA non-coding downstream 25782 15250085 ~ 15250659 (+)
LOC110495440 LOC106575601 non-coding downstream 27042 15207355 ~ 15251952 (+)
G1519875 NA non-coding downstream 29983 15254286 ~ 15254835 (+)
G1519733 NA other upstream 409078 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 666618 14556326 ~ 14558589 (+)
G1519538 NA other upstream 724827 14498786 ~ 14499137 (+)
G1520649 NA other downstream 532190 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 572049 15796262 ~ 15801788 (+)
G1520742 NA other downstream 694854 15919157 ~ 15922899 (+)
G1520748 NA other downstream 713927 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 1241210 16454118 ~ 16468453 (+)

Expression


Co-expression Network