G1519917


Basic Information

Item Value
gene id G1519917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15250085 ~ 15250659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740075
cctcaggagaatgaaaagatttggcatgggtccccagatcctcaaaaggttctacagctgcaccattgagagcatcctgaccggttgcatcactgcctggtatggcatctgaccgtaaggtgctacagagggtatgGCGAATagcccagaacatcactggggccaagcgtcctgccatccaggacctatataataggcggtgtcagaaaaGCCcagaaaattgtcagagactccagtcacccaagttagacttttctctgctaccgcacggcaagcggtaccggagcgccaagtcttggaccaaaaggctcctcaacagcttctacccccaagccattagactgctgaacaattcataaaaattgccaccggacaatttacattgacccctcccTTGTACACTGccgctactcgctgtttgttacctatgcatagtcacttcgtcccaacctacatgtacaggttacctcaactagcctgtacccctgcacactgactcggtgccggtgcccctgtatatagcctcgttattcttattgtgctatattttagattttcttcttcttgaactgcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740075 True 575 lncRNA 0.50 1 15250085 15250659

Neighbor

gene id symbol gene type direction distance location
LOC110495435 LOC100194500 coding upstream 63740 15176401 ~ 15186345 (+)
LOC110495438 tns1 coding upstream 116751 14907954 ~ 15133334 (+)
il8r il8r coding upstream 348731 14898154 ~ 14901354 (+)
LOC118936566 il8r coding upstream 369218 14877692 ~ 14880867 (+)
LOC118941101 il8r coding upstream 388241 14858722 ~ 14861844 (+)
LOC110495444 LOC106575602 coding downstream 5590 15256249 ~ 15266522 (+)
LOC110496998 LOC106592612 coding downstream 25914 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 82726 15333385 ~ 15344802 (+)
LOC110495439 LOC106574706 coding downstream 168402 15419061 ~ 15490199 (+)
LOC110495446 LOC106575524 coding downstream 252355 15503014 ~ 15536810 (+)
G1519916 NA non-coding upstream 140 15249657 ~ 15249945 (+)
G1519915 NA non-coding upstream 486 15249035 ~ 15249599 (+)
G1519904 NA non-coding upstream 25782 15223964 ~ 15224303 (+)
G1519873 LOC106575565 non-coding upstream 58955 15186831 ~ 15191130 (+)
G1519892 NA non-coding upstream 75233 15174631 ~ 15174852 (+)
LOC110495440 LOC106575601 non-coding downstream 686 15207355 ~ 15251952 (+)
G1519875 NA non-coding downstream 3627 15254286 ~ 15254835 (+)
G1519925 NA non-coding downstream 18862 15269521 ~ 15269819 (+)
G1519929 NA non-coding downstream 36149 15286808 ~ 15287029 (+)
G1519932 NA non-coding downstream 42651 15293310 ~ 15293611 (+)
G1519733 NA other upstream 435199 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 692739 14556326 ~ 14558589 (+)
G1519538 NA other upstream 750948 14498786 ~ 14499137 (+)
G1520649 NA other downstream 505834 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 545693 15796262 ~ 15801788 (+)
G1520742 NA other downstream 668498 15919157 ~ 15922899 (+)
G1520748 NA other downstream 687571 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 1214854 16454118 ~ 16468453 (+)

Expression


Co-expression Network