Gene
RNA
| Item | Value |
|---|---|
| gene id | G1519875 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 15254286 ~ 15254835 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1740031 | True | 550 | lncRNA | 0.35 | 1 | 15254286 | 15254835 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495440 | LOC106575601 | coding | upstream | 2334 | 15207355 ~ 15251952 (+) |
| LOC110495435 | LOC100194500 | coding | upstream | 67941 | 15176401 ~ 15186345 (+) |
| LOC110495438 | tns1 | coding | upstream | 120952 | 14907954 ~ 15133334 (+) |
| il8r | il8r | coding | upstream | 352932 | 14898154 ~ 14901354 (+) |
| LOC118936566 | il8r | coding | upstream | 373419 | 14877692 ~ 14880867 (+) |
| LOC110495444 | LOC106575602 | coding | downstream | 1414 | 15256249 ~ 15266522 (+) |
| LOC110496998 | LOC106592612 | coding | downstream | 21738 | 15276573 ~ 15332387 (+) |
| LOC110495449 | LOC106574744 | coding | downstream | 78550 | 15333385 ~ 15344802 (+) |
| LOC110495439 | LOC106574706 | coding | downstream | 164226 | 15419061 ~ 15490199 (+) |
| LOC110495446 | LOC106575524 | coding | downstream | 248179 | 15503014 ~ 15536810 (+) |
| G1519917 | NA | non-coding | upstream | 3627 | 15250085 ~ 15250659 (+) |
| G1519916 | NA | non-coding | upstream | 4341 | 15249657 ~ 15249945 (+) |
| G1519915 | NA | non-coding | upstream | 4687 | 15249035 ~ 15249599 (+) |
| G1519904 | NA | non-coding | upstream | 29983 | 15223964 ~ 15224303 (+) |
| G1519925 | NA | non-coding | downstream | 14686 | 15269521 ~ 15269819 (+) |
| G1519929 | NA | non-coding | downstream | 31973 | 15286808 ~ 15287029 (+) |
| G1519932 | NA | non-coding | downstream | 38475 | 15293310 ~ 15293611 (+) |
| G1519937 | NA | non-coding | downstream | 60502 | 15315337 ~ 15315549 (+) |
| G1519940 | NA | non-coding | downstream | 92573 | 15347408 ~ 15348810 (+) |
| G1519733 | NA | other | upstream | 439400 | 14813982 ~ 14814886 (+) |
| LOC110495481 | LOC106574739 | other | upstream | 696940 | 14556326 ~ 14558589 (+) |
| G1519538 | NA | other | upstream | 755149 | 14498786 ~ 14499137 (+) |
| G1520649 | NA | other | downstream | 501658 | 15756493 ~ 15816005 (+) |
| LOC110495644 | LOC106575583 | other | downstream | 541517 | 15796262 ~ 15801788 (+) |
| G1520742 | NA | other | downstream | 664322 | 15919157 ~ 15922899 (+) |
| G1520748 | NA | other | downstream | 683395 | 15938230 ~ 15938818 (+) |
| LOC110495674 | LOC106575504 | other | downstream | 1210678 | 16454118 ~ 16468453 (+) |
