G1519925


Basic Information

Item Value
gene id G1519925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15269521 ~ 15269819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740083
acacctgtccacaacctcaaacagtcacactccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcatcaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctccctcgatctggggctccacgcaagatctcaccccgtggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacgggggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740083 True 299 lncRNA 0.48 1 15269521 15269819

Neighbor

gene id symbol gene type direction distance location
LOC110495444 LOC106575602 coding upstream 2999 15256249 ~ 15266522 (+)
LOC110495440 LOC106575601 coding upstream 17569 15207355 ~ 15251952 (+)
LOC110495435 LOC100194500 coding upstream 83176 15176401 ~ 15186345 (+)
LOC110495438 tns1 coding upstream 136187 14907954 ~ 15133334 (+)
il8r il8r coding upstream 368167 14898154 ~ 14901354 (+)
LOC110496998 LOC106592612 coding downstream 6754 15276573 ~ 15332387 (+)
LOC110495449 LOC106574744 coding downstream 63566 15333385 ~ 15344802 (+)
LOC110495439 LOC106574706 coding downstream 149242 15419061 ~ 15490199 (+)
LOC110495446 LOC106575524 coding downstream 233195 15503014 ~ 15536810 (+)
LOC110495448 LOC106575529 coding downstream 285040 15554859 ~ 15563239 (+)
G1519875 NA non-coding upstream 14686 15254286 ~ 15254835 (+)
G1519917 NA non-coding upstream 18862 15250085 ~ 15250659 (+)
G1519916 NA non-coding upstream 19576 15249657 ~ 15249945 (+)
G1519915 NA non-coding upstream 19922 15249035 ~ 15249599 (+)
G1519929 NA non-coding downstream 16989 15286808 ~ 15287029 (+)
G1519932 NA non-coding downstream 23491 15293310 ~ 15293611 (+)
G1519937 NA non-coding downstream 45518 15315337 ~ 15315549 (+)
G1519940 NA non-coding downstream 77589 15347408 ~ 15348810 (+)
G1519942 LOC106574694 non-coding downstream 79127 15348946 ~ 15349227 (+)
G1519733 NA other upstream 454635 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 712175 14556326 ~ 14558589 (+)
G1519538 NA other upstream 770384 14498786 ~ 14499137 (+)
G1520649 NA other downstream 486674 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 526533 15796262 ~ 15801788 (+)
G1520742 NA other downstream 649338 15919157 ~ 15922899 (+)
G1520748 NA other downstream 668411 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 1195694 16454118 ~ 16468453 (+)

Expression


Co-expression Network