G1519929


Basic Information

Item Value
gene id G1519929
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15286808 ~ 15287029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740087
GTCACAAAATCAATTGGCTTCCGTGAAGTCTGCTCTGTTTCTCATTGCTGTAAACTCATTCAAGTAGAGTAAATGGTATGCTGGCTACTGTATTGTATCAGCTAATTGATATCTGCATGGAAGTCATGttgttttcattcattttcaTGTAACTGATGATggggaagaaagaggggggaggaagcTTCTTTAGACTATAAAAGATACGCCCATTGTGTTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740087 True 222 lncRNA 0.39 1 15286808 15287029

Neighbor

gene id symbol gene type direction distance location
LOC110495444 LOC106575602 coding upstream 20286 15256249 ~ 15266522 (+)
LOC110495440 LOC106575601 coding upstream 34856 15207355 ~ 15251952 (+)
LOC110495435 LOC100194500 coding upstream 100463 15176401 ~ 15186345 (+)
LOC110495438 tns1 coding upstream 153474 14907954 ~ 15133334 (+)
il8r il8r coding upstream 385454 14898154 ~ 14901354 (+)
LOC110495449 LOC106574744 coding downstream 46356 15333385 ~ 15344802 (+)
LOC110495439 LOC106574706 coding downstream 132032 15419061 ~ 15490199 (+)
LOC110495446 LOC106575524 coding downstream 215985 15503014 ~ 15536810 (+)
LOC110495448 LOC106575529 coding downstream 267830 15554859 ~ 15563239 (+)
LOC110495441 fam171b coding downstream 298879 15585908 ~ 15596051 (+)
G1519925 NA non-coding upstream 16989 15269521 ~ 15269819 (+)
G1519875 NA non-coding upstream 31973 15254286 ~ 15254835 (+)
G1519917 NA non-coding upstream 36149 15250085 ~ 15250659 (+)
G1519916 NA non-coding upstream 36863 15249657 ~ 15249945 (+)
G1519932 NA non-coding downstream 6281 15293310 ~ 15293611 (+)
G1519937 NA non-coding downstream 28308 15315337 ~ 15315549 (+)
G1519940 NA non-coding downstream 60379 15347408 ~ 15348810 (+)
G1519942 LOC106574694 non-coding downstream 61917 15348946 ~ 15349227 (+)
G1519951 LOC106575610 non-coding downstream 71381 15358410 ~ 15399001 (+)
G1519733 NA other upstream 471922 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 729462 14556326 ~ 14558589 (+)
G1519538 NA other upstream 787671 14498786 ~ 14499137 (+)
G1520649 NA other downstream 469464 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 509323 15796262 ~ 15801788 (+)
G1520742 NA other downstream 632128 15919157 ~ 15922899 (+)
G1520748 NA other downstream 651201 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 1178484 16454118 ~ 16468453 (+)

Expression


Co-expression Network