Gene
RNA
| Item | Value |
|---|---|
| gene id | G1520421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 15428174 ~ 15428503 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1740709 | True | 270 | lncRNA | 0.42 | 2 | 15428174 | 15428503 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495449 | LOC106574744 | coding | upstream | 83372 | 15333385 ~ 15344802 (+) |
| LOC110496998 | LOC106592612 | coding | upstream | 95787 | 15276573 ~ 15332387 (+) |
| LOC110495444 | LOC106575602 | coding | upstream | 161652 | 15256249 ~ 15266522 (+) |
| LOC110495440 | LOC106575601 | coding | upstream | 176222 | 15207355 ~ 15251952 (+) |
| LOC110495435 | LOC100194500 | coding | upstream | 241829 | 15176401 ~ 15186345 (+) |
| LOC110495446 | LOC106575524 | coding | downstream | 74511 | 15503014 ~ 15536810 (+) |
| LOC110495448 | LOC106575529 | coding | downstream | 126356 | 15554859 ~ 15563239 (+) |
| LOC110495441 | fam171b | coding | downstream | 157405 | 15585908 ~ 15596051 (+) |
| LOC110495451 | fbx36 | coding | downstream | 178980 | 15603978 ~ 15615215 (+) |
| LOC110495637 | LOC106575461 | coding | downstream | 193684 | 15622187 ~ 15674929 (+) |
| G1520404 | NA | non-coding | upstream | 12460 | 15415489 ~ 15415714 (+) |
| G1520402 | NA | non-coding | upstream | 14612 | 15413297 ~ 15413562 (+) |
| G1519970 | NA | non-coding | upstream | 21636 | 15406062 ~ 15406538 (+) |
| G1519968 | LOC106574694 | non-coding | upstream | 23409 | 15403331 ~ 15404765 (+) |
| G1519966 | NA | non-coding | upstream | 29633 | 15396269 ~ 15398541 (+) |
| G1520413 | NA | non-coding | downstream | 65443 | 15493946 ~ 15494848 (+) |
| G1520450 | LOC106574707 | non-coding | downstream | 67921 | 15496424 ~ 15497199 (+) |
| G1520451 | NA | non-coding | downstream | 69604 | 15498107 ~ 15498333 (+) |
| G1520456 | NA | non-coding | downstream | 73436 | 15501939 ~ 15502231 (+) |
| G1520473 | NA | non-coding | downstream | 108413 | 15536916 ~ 15537903 (+) |
| il8r | il8r | other | upstream | 528002 | 14898154 ~ 14901354 (+) |
| G1519733 | NA | other | upstream | 613288 | 14813982 ~ 14814886 (+) |
| LOC110495481 | LOC106574739 | other | upstream | 870828 | 14556326 ~ 14558589 (+) |
| G1519538 | NA | other | upstream | 929037 | 14498786 ~ 14499137 (+) |
| G1520649 | NA | other | downstream | 327990 | 15756493 ~ 15816005 (+) |
| LOC110495644 | LOC106575583 | other | downstream | 367849 | 15796262 ~ 15801788 (+) |
| G1520742 | NA | other | downstream | 490654 | 15919157 ~ 15922899 (+) |
| G1520748 | NA | other | downstream | 509727 | 15938230 ~ 15938818 (+) |
| LOC110495674 | LOC106575504 | other | downstream | 1037010 | 16454118 ~ 16468453 (+) |
