G1520456


Basic Information

Item Value
gene id G1520456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15501939 ~ 15502231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740744
TTCCCAGACGAAGAACCTCCCTCTGTGTCACCTCCTTTGAGAACCAGACCCTAATGGGAAAGGATAGCATGCATGCATATGGTGGCGGCCATTCTGCTGTATCACTTTCATCCATGAATgtattctgtgctttcaactagGAACTATCCACCTCTTTCAGATCAGTGGTTGTAAGGAATCGGACAGAGAGGGAAATACGTCTTTAGGACATCATTTCCACAACATTTTCCTGTTACCTTGGTTTGACTGTGGCAATATCCTGTATATTATTCACAGCGACCAATACTAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740744 True 293 lncRNA 0.43 1 15501939 15502231

Neighbor

gene id symbol gene type direction distance location
LOC110495439 LOC106574706 coding upstream 11740 15419061 ~ 15490199 (+)
LOC110495449 LOC106574744 coding upstream 157137 15333385 ~ 15344802 (+)
LOC110496998 LOC106592612 coding upstream 169552 15276573 ~ 15332387 (+)
LOC110495444 LOC106575602 coding upstream 235417 15256249 ~ 15266522 (+)
LOC110495440 LOC106575601 coding upstream 249987 15207355 ~ 15251952 (+)
LOC110495446 LOC106575524 coding downstream 783 15503014 ~ 15536810 (+)
LOC110495448 LOC106575529 coding downstream 52628 15554859 ~ 15563239 (+)
LOC110495441 fam171b coding downstream 83677 15585908 ~ 15596051 (+)
LOC110495451 fbx36 coding downstream 105252 15603978 ~ 15615215 (+)
LOC110495637 LOC106575461 coding downstream 119956 15622187 ~ 15674929 (+)
G1520451 NA non-coding upstream 3606 15498107 ~ 15498333 (+)
G1520450 LOC106574707 non-coding upstream 4740 15496424 ~ 15497199 (+)
G1520413 NA non-coding upstream 7091 15493946 ~ 15494848 (+)
G1520421 NA non-coding upstream 73436 15428174 ~ 15428503 (+)
G1520404 NA non-coding upstream 86225 15415489 ~ 15415714 (+)
G1520473 NA non-coding downstream 34685 15536916 ~ 15537903 (+)
G1520474 NA non-coding downstream 37434 15539665 ~ 15541328 (+)
G1520529 NA non-coding downstream 39230 15541461 ~ 15541662 (+)
G1520533 NA non-coding downstream 41715 15543946 ~ 15544242 (+)
G1520546 NA non-coding downstream 42585 15544816 ~ 15545020 (+)
il8r il8r other upstream 601767 14898154 ~ 14901354 (+)
G1519733 NA other upstream 687053 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 944593 14556326 ~ 14558589 (+)
G1519538 NA other upstream 1002802 14498786 ~ 14499137 (+)
G1520649 NA other downstream 254262 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 294121 15796262 ~ 15801788 (+)
G1520742 NA other downstream 416926 15919157 ~ 15922899 (+)
G1520748 NA other downstream 435999 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 963282 16454118 ~ 16468453 (+)

Expression


Co-expression Network