G1520565


Basic Information

Item Value
gene id G1520565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15590725 ~ 15606818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740865
ttgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaattttttttcccattcctccttgcaaaacagctcgagctcagtgatgttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggagatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacattttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatat

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740865 True 741 lncRNA 0.43 2 15590725 15606818

Neighbor

gene id symbol gene type direction distance location
LOC110495448 LOC106575529 coding upstream 27486 15554859 ~ 15563239 (+)
LOC110495446 LOC106575524 coding upstream 53915 15503014 ~ 15536810 (+)
LOC110495439 LOC106574706 coding upstream 100526 15419061 ~ 15490199 (+)
LOC110495449 LOC106574744 coding upstream 245923 15333385 ~ 15344802 (+)
LOC110496998 LOC106592612 coding upstream 258338 15276573 ~ 15332387 (+)
LOC110495451 fbx36 coding downstream 665 15603978 ~ 15615215 (+)
LOC110495637 LOC106575461 coding downstream 15369 15622187 ~ 15674929 (+)
LOC110495639 LOC106575596 coding downstream 114515 15721333 ~ 15723189 (+)
LOC110495640 LOC106599837 coding downstream 116889 15723707 ~ 15730830 (+)
LOC110495642 LOC106574719 coding downstream 127502 15734320 ~ 15749637 (+)
G1520548 NA non-coding upstream 42336 15547947 ~ 15548389 (+)
G1520546 NA non-coding upstream 45705 15544816 ~ 15545020 (+)
G1520533 NA non-coding upstream 46483 15543946 ~ 15544242 (+)
G1520529 NA non-coding upstream 49063 15541461 ~ 15541662 (+)
G1520677 NA non-coding downstream 217909 15824727 ~ 15825140 (+)
G1520691 NA non-coding downstream 262916 15869734 ~ 15870666 (+)
G1520697 NA non-coding downstream 269333 15876151 ~ 15878418 (+)
G1520704 LOC106595378 non-coding downstream 279524 15886342 ~ 15893668 (+)
LOC110495440 LOC106575601 other upstream 374481 15207355 ~ 15251952 (+)
il8r il8r other upstream 690553 14898154 ~ 14901354 (+)
G1519733 NA other upstream 775839 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 1033379 14556326 ~ 14558589 (+)
G1519538 NA other upstream 1091588 14498786 ~ 14499137 (+)
G1520649 NA other downstream 149675 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other downstream 189534 15796262 ~ 15801788 (+)
G1520742 NA other downstream 312339 15919157 ~ 15922899 (+)
G1520748 NA other downstream 331412 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 858695 16454118 ~ 16468453 (+)

Expression


Co-expression Network