G1520649


Basic Information

Item Value
gene id G1520649
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15756493 ~ 15816005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740959
gtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaagaagaagactgatcagacatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggttggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctaggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740959 True 538 TUCP 0.45 2 15756493 15816005

Neighbor

gene id symbol gene type direction distance location
LOC110495642 LOC106574719 coding upstream 6856 15734320 ~ 15749637 (+)
LOC110495640 LOC106599837 coding upstream 25663 15723707 ~ 15730830 (+)
LOC110495639 LOC106575596 coding upstream 33304 15721333 ~ 15723189 (+)
LOC110495637 LOC106575461 coding upstream 81564 15622187 ~ 15674929 (+)
LOC110495451 fbx36 coding upstream 141278 15603978 ~ 15615215 (+)
LOC110495647 NA coding downstream 1492 15817497 ~ 15820461 (+)
LOC110495648 LOC106575580 coding downstream 9843 15825848 ~ 15841645 (+)
LOC110495650 LOC106575578 coding downstream 31363 15847368 ~ 15852257 (+)
LOC110495649 LOC106574731 coding downstream 36639 15852644 ~ 15865039 (+)
LOC110495654 LOC106575575 coding downstream 177608 15993613 ~ 15996859 (+)
G1520560 NA non-coding upstream 124408 15577484 ~ 15632085 (+)
G1520565 NA non-coding upstream 149675 15590725 ~ 15606818 (+)
LOC110495448 LOC106575529 non-coding upstream 194179 15554859 ~ 15563239 (+)
G1520677 NA non-coding downstream 8722 15824727 ~ 15825140 (+)
G1520691 NA non-coding downstream 53729 15869734 ~ 15870666 (+)
G1520697 NA non-coding downstream 60146 15876151 ~ 15878418 (+)
G1520704 LOC106595378 non-coding downstream 70337 15886342 ~ 15893668 (+)
G1520705 NA non-coding downstream 71180 15887185 ~ 15887551 (+)
LOC110495440 LOC106575601 other upstream 540249 15207355 ~ 15251952 (+)
il8r il8r other upstream 856321 14898154 ~ 14901354 (+)
G1519733 NA other upstream 941607 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 1199147 14556326 ~ 14558589 (+)
G1519538 NA other upstream 1257356 14498786 ~ 14499137 (+)
G1520742 NA other downstream 103152 15919157 ~ 15922899 (+)
G1520748 NA other downstream 122225 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 649508 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1807811 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1950214 17766219 ~ 17766694 (+)

Expression


Co-expression Network