G1520742


Basic Information

Item Value
gene id G1520742
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15919157 ~ 15922899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741071
CTCTGTTTCATATAGACTCATACCTGTTTTATATAGACTCATACCTGTTTTAAATAGATTAAATTCCTCTGTTTCATATAGACTCATACCTGTTTTATATAGACTCATACCTGTTTTATATAGATTAAATTCCTCTGTTTCATATAGACTCATacctgttttatatagactgaaCCCCTCTGTTTCATATAGACTCATACCTGTTTTAAATATATTAAATTCCTCTGTTTCATATAGACTCAACCCCTCTGTTTCATATAGACTGAACCCCTCTGTTTTATATAGACTCATACCTGTTTTAAATAGATTAAATTCCTCTGTTTCATATAGACTCATACCTGTTTTATATAGATTAAATTCCTCTGTTTCATATAGACTCATacctgttttatatagactgaacccctctgtttcatatagactcatacctgtttcatatagactcaacccctctgttttatatagactgaaCCCCTCTGTTTCATATAGACCTGTTTTATATAGACTCAACCCCTCTGTTTCATATAGACTGAACCCCTCTGTTTCATATAGACTCAACCCCTCTGTTTTATATAGACTCATacctgttttatatagactgaacccctctgttttatatagactcatacctgtttcatatagactcaacccctctgttttatatagactcatacctgttttatatagactgaacccctctgttttatatagactcatacctgttttatatagactgaaCCACTCTGTTTCACATAGACACAATCCCTCTGTTTCATATAGACTCACACAttctgttttatatagactgaaCCACTCTGTTTCATAAAGACTCAATTCCTCTGTTTTATATAGACTCATacctgttttatatagactgaacccctctgttttatatagactgaaCCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCACATAGACACAATCCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTATGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCAAACCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTTATATAGACTCACACATTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCACACAttctgttttatatagactgaaCCACTCTGTTTCACATAGACACAATCCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCACACAtttgtgttttatatagactcaATCCCTCTGTTTCATATAGACTCATACCTGTTTTATATAGACTCAATCCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCACACATTTGTGTTTCATATAGACTCAATCACTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTTATATAGACTCAATTCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGTCTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAAACCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACCCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCACACATTTGTGTTTCATATAGACTCAATCACTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTTATATAGACTCAATTCCTCTGTTTTATATAGACTCAATCCCTTTGTTTCATATAGTCTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGTCTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAAACCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACCCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCACATAGACTCAATCCCTCTGTTTCATATAGACCCAATCCCTATGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAAACCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAAACCCTCTGTTTTATATAGACTCAACCCCTCTGTTTCATATAGACTCAAACCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATTGACTCAATCCCTCAGTTTCACATAGACTCAATCCCTCAGTTTCACATAGACTCAATCCCTCTGTTTTATATAGACTCAATCCCTCTGTTTCATATAGACTTACACATTCTGTTTTATATAGACTCAATCCCTCTGTTTCATTTAAACTAAATCCCTCTGTTTCATATAGACTCAATCCTTCAGTTTCACATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCAATCCCTCTGTTTCATATAGACTCACACATTCTGTTTTATATAGACTCCATCCCTCTGTTTCATATAGACTCAAGTCTTCTGTTTCATATAGACTCAATACTTCTGTGTAAAGtccttaagtaaaaatactttaaagtactacttaagtagttttggggggtatctgtactttactatttatatttttgacaaatgttttacttttccttcactacattcctaaatatgtatatactgtttactccatacattttccctgacactcaaaagtactcgttacattttgacaggaaaatggtccaattcacacacttatcaaccgaacatccttggtcatccctactgcctctgatctggcggactcactaaacacaaatgctttgtttgtaaattatgtctgagtgttgaagtgtgcccctggccCCTGGCCCCTGGCCTCTGGCCCctggcccctggctatccgtcaataaaaatacaaatatacaattgtgccttctggtttgcttaatataaggcaTTTGACATAGTTTTACTTTGACTTTTGATGCTTAATTATATTTTAAACTaaatactttcagacttttactcaaggagaattttactgggtgactcacttttacttgagtcatttaaggtatctttacttttactcaactatgacagttgggtactttgtCCACCACTGGACTCAATCCCTCTATTTCTATTTCCTTTCTTCTGTCTACTACAGGACAGTGTCTATCGGATAGCTTCTACTAGTAATGGCTCCATGTTcatctctgcacacacacacactacaggacAGTGTCTATCGGATAGCATCTACTAGTAATGGCTCCACGTTcatct

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613027 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741071 True 3671 TUCP 0.35 3 15919157 15922899

Neighbor

gene id symbol gene type direction distance location
LOC110495649 LOC106574731 coding upstream 54118 15852644 ~ 15865039 (+)
LOC110495650 LOC106575578 coding upstream 66900 15847368 ~ 15852257 (+)
LOC110495648 LOC106575580 coding upstream 77512 15825848 ~ 15841645 (+)
LOC110495647 NA coding upstream 98696 15817497 ~ 15820461 (+)
LOC110495646 LOC106575584 coding upstream 110671 15804179 ~ 15808486 (+)
LOC110495654 LOC106575575 coding downstream 70714 15993613 ~ 15996859 (+)
LOC110495655 LOC106574721 coding downstream 86876 16009775 ~ 16021896 (+)
LOC110495658 LOC100136184 coding downstream 124246 16047145 ~ 16060945 (+)
LOC110495657 LOC100380633 coding downstream 153093 16075992 ~ 16089889 (+)
LOC110495667 LOC106575562 coding downstream 349337 16272236 ~ 16277918 (+)
G1520739 NA non-coding upstream 1925 15916626 ~ 15917232 (+)
G1520738 NA non-coding upstream 2611 15913440 ~ 15916546 (+)
G1520737 NA non-coding upstream 12190 15902241 ~ 15906967 (+)
G1520704 LOC106595378 non-coding upstream 25489 15886342 ~ 15893668 (+)
G1520705 NA non-coding upstream 31606 15887185 ~ 15887551 (+)
G1520743 NA non-coding downstream 4490 15927389 ~ 15927935 (+)
G1520744 NA non-coding downstream 5287 15928186 ~ 15928745 (+)
G1520747 NA non-coding downstream 9861 15932760 ~ 15932979 (+)
G1520751 NA non-coding downstream 25927 15948826 ~ 15949093 (+)
G1520758 NA non-coding downstream 41644 15964543 ~ 15965493 (+)
G1520649 NA other upstream 103152 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 119276 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 702913 15207355 ~ 15251952 (+)
il8r il8r other upstream 1018985 14898154 ~ 14901354 (+)
G1519733 NA other upstream 1104271 14813982 ~ 14814886 (+)
G1520748 NA other downstream 15331 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 542614 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1700917 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1843320 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1916770 17839669 ~ 17844014 (+)

Expression


Co-expression Network