G1520747


Basic Information

Item Value
gene id G1520747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15932760 ~ 15932979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741076
ctctttgtctgtatctctccccctATACTCCaatccaacctctctctctctctttgtctgtatctctccccctATACTccactccatcctctctctctctttgtctgtatcTCTCCTCCTATACTccactccatcctctctctctatttgtctgtATCTCTCCTCCTATACTCcactccaacctctctctctctttgtctgtatctctccccctATACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741076 True 220 lncRNA 0.47 1 15932760 15932979

Neighbor

gene id symbol gene type direction distance location
LOC110495649 LOC106574731 coding upstream 67721 15852644 ~ 15865039 (+)
LOC110495650 LOC106575578 coding upstream 80503 15847368 ~ 15852257 (+)
LOC110495648 LOC106575580 coding upstream 91115 15825848 ~ 15841645 (+)
LOC110495647 NA coding upstream 112299 15817497 ~ 15820461 (+)
LOC110495646 LOC106575584 coding upstream 124274 15804179 ~ 15808486 (+)
LOC110495654 LOC106575575 coding downstream 60634 15993613 ~ 15996859 (+)
LOC110495655 LOC106574721 coding downstream 76796 16009775 ~ 16021896 (+)
LOC110495658 LOC100136184 coding downstream 114166 16047145 ~ 16060945 (+)
LOC110495657 LOC100380633 coding downstream 143013 16075992 ~ 16089889 (+)
LOC110495667 LOC106575562 coding downstream 339257 16272236 ~ 16277918 (+)
G1520744 NA non-coding upstream 4015 15928186 ~ 15928745 (+)
G1520743 NA non-coding upstream 4825 15927389 ~ 15927935 (+)
G1520739 NA non-coding upstream 15528 15916626 ~ 15917232 (+)
G1520738 NA non-coding upstream 16214 15913440 ~ 15916546 (+)
G1520737 NA non-coding upstream 25793 15902241 ~ 15906967 (+)
G1520751 NA non-coding downstream 15847 15948826 ~ 15949093 (+)
G1520758 NA non-coding downstream 31564 15964543 ~ 15965493 (+)
G1520760 NA non-coding downstream 38087 15971066 ~ 15972881 (+)
G1520761 NA non-coding downstream 38757 15971736 ~ 15972682 (+)
G1520763 NA non-coding downstream 40849 15973828 ~ 15974077 (+)
G1520742 NA other upstream 9861 15919157 ~ 15922899 (+)
G1520649 NA other upstream 116755 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 132879 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 716516 15207355 ~ 15251952 (+)
il8r il8r other upstream 1032588 14898154 ~ 14901354 (+)
G1520748 NA other downstream 5251 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 532534 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1690837 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1833240 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1906690 17839669 ~ 17844014 (+)

Expression


Co-expression Network