Gene
RNA
| Item | Value |
|---|---|
| gene id | G1520748 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 15938230 ~ 15938818 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative proline-rich protein 21 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1741077 | False | 225 | TUCP | 0.39 | 2 | 15938230 | 15938818 |
| TU1741078 | True | 222 | TUCP | 0.42 | 2 | 15938401 | 15938818 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495649 | LOC106574731 | coding | upstream | 73191 | 15852644 ~ 15865039 (+) |
| LOC110495650 | LOC106575578 | coding | upstream | 85973 | 15847368 ~ 15852257 (+) |
| LOC110495648 | LOC106575580 | coding | upstream | 96585 | 15825848 ~ 15841645 (+) |
| LOC110495647 | NA | coding | upstream | 117769 | 15817497 ~ 15820461 (+) |
| LOC110495646 | LOC106575584 | coding | upstream | 129744 | 15804179 ~ 15808486 (+) |
| LOC110495654 | LOC106575575 | coding | downstream | 54795 | 15993613 ~ 15996859 (+) |
| LOC110495655 | LOC106574721 | coding | downstream | 70957 | 16009775 ~ 16021896 (+) |
| LOC110495658 | LOC100136184 | coding | downstream | 108327 | 16047145 ~ 16060945 (+) |
| LOC110495657 | LOC100380633 | coding | downstream | 137174 | 16075992 ~ 16089889 (+) |
| LOC110495667 | LOC106575562 | coding | downstream | 333418 | 16272236 ~ 16277918 (+) |
| G1520747 | NA | non-coding | upstream | 5251 | 15932760 ~ 15932979 (+) |
| G1520744 | NA | non-coding | upstream | 9485 | 15928186 ~ 15928745 (+) |
| G1520743 | NA | non-coding | upstream | 10295 | 15927389 ~ 15927935 (+) |
| G1520739 | NA | non-coding | upstream | 20998 | 15916626 ~ 15917232 (+) |
| G1520738 | NA | non-coding | upstream | 21684 | 15913440 ~ 15916546 (+) |
| G1520751 | NA | non-coding | downstream | 10008 | 15948826 ~ 15949093 (+) |
| G1520758 | NA | non-coding | downstream | 25725 | 15964543 ~ 15965493 (+) |
| G1520760 | NA | non-coding | downstream | 32248 | 15971066 ~ 15972881 (+) |
| G1520761 | NA | non-coding | downstream | 32918 | 15971736 ~ 15972682 (+) |
| G1520763 | NA | non-coding | downstream | 35010 | 15973828 ~ 15974077 (+) |
| G1520742 | NA | other | upstream | 15331 | 15919157 ~ 15922899 (+) |
| G1520649 | NA | other | upstream | 122225 | 15756493 ~ 15816005 (+) |
| LOC110495644 | LOC106575583 | other | upstream | 138349 | 15796262 ~ 15801788 (+) |
| LOC110495440 | LOC106575601 | other | upstream | 721986 | 15207355 ~ 15251952 (+) |
| il8r | il8r | other | upstream | 1038058 | 14898154 ~ 14901354 (+) |
| LOC110495674 | LOC106575504 | other | downstream | 526695 | 16454118 ~ 16468453 (+) |
| LOC110527374 | LOC106592210 | other | downstream | 1684998 | 17623786 ~ 17631132 (+) |
| G1522415 | LOC106575491 | other | downstream | 1827401 | 17766219 ~ 17766694 (+) |
| G1522437 | LOC106575479 | other | downstream | 1900851 | 17839669 ~ 17844014 (+) |
| G1522438 | NA | other | downstream | 1917323 | 17856141 ~ 17860614 (+) |
