Gene
RNA
| Item | Value |
|---|---|
| gene id | G1520780 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 16024542 ~ 16024777 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1741112 | True | 236 | lncRNA | 0.37 | 1 | 16024542 | 16024777 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495655 | LOC106574721 | coding | upstream | 2646 | 16009775 ~ 16021896 (+) |
| LOC110495654 | LOC106575575 | coding | upstream | 27683 | 15993613 ~ 15996859 (+) |
| LOC110495649 | LOC106574731 | coding | upstream | 159503 | 15852644 ~ 15865039 (+) |
| LOC110495650 | LOC106575578 | coding | upstream | 172285 | 15847368 ~ 15852257 (+) |
| LOC110495648 | LOC106575580 | coding | upstream | 182897 | 15825848 ~ 15841645 (+) |
| LOC110495658 | LOC100136184 | coding | downstream | 22368 | 16047145 ~ 16060945 (+) |
| LOC110495657 | LOC100380633 | coding | downstream | 51215 | 16075992 ~ 16089889 (+) |
| LOC110495667 | LOC106575562 | coding | downstream | 247459 | 16272236 ~ 16277918 (+) |
| LOC110497062 | LOC106575548 | coding | downstream | 264104 | 16288881 ~ 16332222 (+) |
| LOC110495668 | LOC106575499 | coding | downstream | 313548 | 16338325 ~ 16345761 (+) |
| G1520778 | NA | non-coding | upstream | 7890 | 16016230 ~ 16016652 (+) |
| G1520777 | NA | non-coding | upstream | 8692 | 16015607 ~ 16015850 (+) |
| G1520776 | NA | non-coding | upstream | 15167 | 16009045 ~ 16009375 (+) |
| G1520767 | NA | non-coding | upstream | 46294 | 15977986 ~ 15978248 (+) |
| G1520781 | NA | non-coding | downstream | 203 | 16024980 ~ 16025267 (+) |
| G1520782 | NA | non-coding | downstream | 739 | 16025516 ~ 16025715 (+) |
| G1520787 | NA | non-coding | downstream | 7376 | 16032153 ~ 16032400 (+) |
| G1520797 | NA | non-coding | downstream | 28314 | 16053091 ~ 16053397 (+) |
| G1520804 | NA | non-coding | downstream | 131123 | 16155900 ~ 16156236 (+) |
| G1520748 | NA | other | upstream | 85724 | 15938230 ~ 15938818 (+) |
| G1520742 | NA | other | upstream | 101643 | 15919157 ~ 15922899 (+) |
| G1520649 | NA | other | upstream | 208537 | 15756493 ~ 15816005 (+) |
| LOC110495644 | LOC106575583 | other | upstream | 224661 | 15796262 ~ 15801788 (+) |
| LOC110495440 | LOC106575601 | other | upstream | 808298 | 15207355 ~ 15251952 (+) |
| LOC110495674 | LOC106575504 | other | downstream | 440736 | 16454118 ~ 16468453 (+) |
| LOC110527374 | LOC106592210 | other | downstream | 1599039 | 17623786 ~ 17631132 (+) |
| G1522415 | LOC106575491 | other | downstream | 1741442 | 17766219 ~ 17766694 (+) |
| G1522437 | LOC106575479 | other | downstream | 1814892 | 17839669 ~ 17844014 (+) |
| G1522438 | NA | other | downstream | 1831364 | 17856141 ~ 17860614 (+) |
