G1520733


Basic Information

Item Value
gene id G1520733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16185213 ~ 16191473 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741062
GCACTTTAATAATCTTTACACATCCAACATTActcatctatatactgtattctataccatctactgcatcttgcataTGCCGCAcgaccatcgctcatccatatatttatatgtacatattctattcatccctttacatttgtgtgtataaggtagttgttgtgaatgtattagattacttgttagatattactgtattgtcggaactagaagcacaagcatttcgttacactcgcattaacatctgcaaaccatgtgtatgtgatcaataaaatttgatttgatttcatgatAAAGATCATCTGAAAAGCAGACATTTCATTCATGTATCAGAGTATCAATGTATCCAGGGTAGCACATTATGGTTAGGGTATAAATATGTAGTCCTAACCCTATTGGCATTGAACTGACATTATTATCAACCTTTACTGTTTATATCTAGAATTCCGCTTGCTGGGTGTATCTGGTCTATGTAGTCTGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741062 True 483 lncRNA 0.34 2 16185213 16191473

Neighbor

gene id symbol gene type direction distance location
LOC110495657 LOC100380633 coding upstream 95324 16075992 ~ 16089889 (+)
LOC110495658 LOC100136184 coding upstream 124268 16047145 ~ 16060945 (+)
LOC110495655 LOC106574721 coding upstream 163317 16009775 ~ 16021896 (+)
LOC110495654 LOC106575575 coding upstream 188354 15993613 ~ 15996859 (+)
LOC110495649 LOC106574731 coding upstream 320174 15852644 ~ 15865039 (+)
LOC110495667 LOC106575562 coding downstream 80763 16272236 ~ 16277918 (+)
LOC110497062 LOC106575548 coding downstream 97408 16288881 ~ 16332222 (+)
LOC110495668 LOC106575499 coding downstream 146852 16338325 ~ 16345761 (+)
LOC110495670 tgds coding downstream 161360 16352833 ~ 16367882 (+)
gucy1b2 LOC106575503 coding downstream 230772 16422245 ~ 16427538 (+)
G1520804 NA non-coding upstream 28977 16155900 ~ 16156236 (+)
G1520797 NA non-coding upstream 131816 16053091 ~ 16053397 (+)
G1520787 NA non-coding upstream 152813 16032153 ~ 16032400 (+)
G1520782 NA non-coding upstream 159498 16025516 ~ 16025715 (+)
G1520781 NA non-coding upstream 159946 16024980 ~ 16025267 (+)
G1520876 NA non-coding downstream 39104 16230577 ~ 16231069 (+)
G1520964 NA non-coding downstream 220747 16412220 ~ 16412575 (+)
LOC110495673 NA non-coding downstream 236124 16427597 ~ 16431410 (+)
G1520968 NA non-coding downstream 240248 16431721 ~ 16431929 (+)
G1520748 NA other upstream 246395 15938230 ~ 15938818 (+)
G1520742 NA other upstream 262314 15919157 ~ 15922899 (+)
G1520649 NA other upstream 369208 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 385332 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 968969 15207355 ~ 15251952 (+)
LOC110495674 LOC106575504 other downstream 274040 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1432343 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1574746 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1648196 17839669 ~ 17844014 (+)
G1522438 NA other downstream 1664668 17856141 ~ 17860614 (+)

Expression


Co-expression Network