G1520876


Basic Information

Item Value
gene id G1520876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16230577 ~ 16231069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741213
atCAAAATAAATTTCACCTCAGGTAAATAATGAAAcaagttcaatttggtttaaataatgcaaagtccaacaaagtgttggagaagaaagtaaaactgcaatatgttccatgtaaaatatgtgccatgtaagaaagctaacgtttcagttccttgctcagaacataagaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttatgttgtggttattataggaataataggactatttccctctataccatttgtatttcattaacctttgactattggatgttcttataggcactttagtattgccagtgtaacagtatagcttccgtccctctcctcgctcctccctgggctcgaaccagcaacacaatgacaattagcacgcgctaactagctagccatttcacttcggttacacaagcctcatctcgggagttgataggcttgaagtcataaacagcgcaatgcatgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741213 True 493 lncRNA 0.38 1 16230577 16231069

Neighbor

gene id symbol gene type direction distance location
LOC110495657 LOC100380633 coding upstream 140688 16075992 ~ 16089889 (+)
LOC110495658 LOC100136184 coding upstream 169632 16047145 ~ 16060945 (+)
LOC110495655 LOC106574721 coding upstream 208681 16009775 ~ 16021896 (+)
LOC110495654 LOC106575575 coding upstream 233718 15993613 ~ 15996859 (+)
LOC110495649 LOC106574731 coding upstream 365538 15852644 ~ 15865039 (+)
LOC110495667 LOC106575562 coding downstream 41167 16272236 ~ 16277918 (+)
LOC110497062 LOC106575548 coding downstream 57812 16288881 ~ 16332222 (+)
LOC110495668 LOC106575499 coding downstream 107256 16338325 ~ 16345761 (+)
LOC110495670 tgds coding downstream 121764 16352833 ~ 16367882 (+)
gucy1b2 LOC106575503 coding downstream 191176 16422245 ~ 16427538 (+)
G1520721 NA non-coding upstream 26975 16157267 ~ 16203602 (+)
G1520736 NA non-coding upstream 38405 16185985 ~ 16192172 (+)
G1520733 NA non-coding upstream 39104 16185213 ~ 16191473 (+)
G1520804 NA non-coding upstream 74341 16155900 ~ 16156236 (+)
G1520797 NA non-coding upstream 177180 16053091 ~ 16053397 (+)
G1520964 NA non-coding downstream 181151 16412220 ~ 16412575 (+)
LOC110495673 NA non-coding downstream 196528 16427597 ~ 16431410 (+)
G1520968 NA non-coding downstream 200652 16431721 ~ 16431929 (+)
G1520973 NA non-coding downstream 207890 16438959 ~ 16439393 (+)
G1520748 NA other upstream 291759 15938230 ~ 15938818 (+)
G1520742 NA other upstream 307678 15919157 ~ 15922899 (+)
G1520649 NA other upstream 414572 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 430696 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 1014333 15207355 ~ 15251952 (+)
LOC110495674 LOC106575504 other downstream 234444 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1392747 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1535150 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1608600 17839669 ~ 17844014 (+)
G1522438 NA other downstream 1625072 17856141 ~ 17860614 (+)

Expression


Co-expression Network