G1520964


Basic Information

Item Value
gene id G1520964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16412220 ~ 16412575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741338
ttatctgtttggtccctcagtcaagcattgaattttaaacacagattcaaccacaaagaccagggaagtttccaatggctcgcaaagaagggcacctggcCACTCTTCATCTATCAGCGAGTATCTGTGGACCGACCAAGGTCCACTGTCACCCAGGAGCCTGTGTCCATGACATCGACTCCCTCCTGCCCACGGTTCTGGCCAACTACTCCAATATTGACACCATCGTCACTCACATAGGTTTTAACGACCTGGTAGTGCTCCAGTTCTCCATGTCAGAATAAGCAACAGAGGACTTGGAAATCATATCAACTCCTGCAGAAAAGGCACAATGGTTATTGTGAGTAACCTAATTG

Function

NR:

description
PREDICTED: guanylate cyclase soluble subunit beta-2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741338 True 356 lncRNA 0.47 1 16412220 16412575

Neighbor

gene id symbol gene type direction distance location
LOC110495670 tgds coding upstream 44338 16352833 ~ 16367882 (+)
LOC110495668 LOC106575499 coding upstream 66459 16338325 ~ 16345761 (+)
LOC110497062 LOC106575548 coding upstream 79998 16288881 ~ 16332222 (+)
LOC110495667 LOC106575562 coding upstream 134302 16272236 ~ 16277918 (+)
LOC110495657 LOC100380633 coding upstream 322331 16075992 ~ 16089889 (+)
gucy1b2 LOC106575503 coding downstream 9670 16422245 ~ 16427538 (+)
LOC110495673 NA coding downstream 15399 16427597 ~ 16431410 (+)
LOC110495674 LOC106575504 coding downstream 41543 16454118 ~ 16468453 (+)
LOC110495678 LOC106575507 coding downstream 58529 16471104 ~ 16474100 (+)
LOC110495675 LOC106575507 coding downstream 63897 16476472 ~ 16486304 (+)
G1520876 NA non-coding upstream 181151 16230577 ~ 16231069 (+)
G1520721 NA non-coding upstream 208618 16157267 ~ 16203602 (+)
G1520736 NA non-coding upstream 220048 16185985 ~ 16192172 (+)
G1520733 NA non-coding upstream 220747 16185213 ~ 16191473 (+)
G1520968 NA non-coding downstream 19146 16431721 ~ 16431929 (+)
G1520973 NA non-coding downstream 26384 16438959 ~ 16439393 (+)
G1521008 NA non-coding downstream 103531 16516106 ~ 16516354 (+)
G1521026 NA non-coding downstream 127253 16539828 ~ 16540341 (+)
G1520748 NA other upstream 473402 15938230 ~ 15938818 (+)
G1520742 NA other upstream 489321 15919157 ~ 15922899 (+)
G1520649 NA other upstream 596215 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 612339 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 1195976 15207355 ~ 15251952 (+)
LOC110527374 LOC106592210 other downstream 1211241 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1353644 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1427094 17839669 ~ 17844014 (+)
G1522438 NA other downstream 1443566 17856141 ~ 17860614 (+)

Expression


Co-expression Network