G1520973


Basic Information

Item Value
gene id G1520973
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16438959 ~ 16439393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741347
atattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatacactgaacaaaaatataaacgcagcatgtaaagtgttggtcccatgtttcataagctgaaataaaagatcccagaaatgttccatacgcacaaaaaccttatttctctcaaactttgccaagagaatccatccacctgacaggtgtggcatatcaagaagctgattaaacagcatgatcattacacaggtgcctcTTGTGACCAGATCCTGAGGACCATTCATTTAAGGTatctatctgtattcccagtcaagtgaaatccatagattagagccaaaacattttttttctcaattgactgatttcctcgtatgaactgtaactcagtaaaatctttgaaatggttacatgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741347 True 435 lncRNA 0.38 1 16438959 16439393

Neighbor

gene id symbol gene type direction distance location
LOC110495673 NA coding upstream 7606 16427597 ~ 16431410 (+)
gucy1b2 LOC106575503 coding upstream 11421 16422245 ~ 16427538 (+)
LOC110495670 tgds coding upstream 71077 16352833 ~ 16367882 (+)
LOC110495668 LOC106575499 coding upstream 93198 16338325 ~ 16345761 (+)
LOC110497062 LOC106575548 coding upstream 106737 16288881 ~ 16332222 (+)
LOC110495674 LOC106575504 coding downstream 14725 16454118 ~ 16468453 (+)
LOC110495678 LOC106575507 coding downstream 31711 16471104 ~ 16474100 (+)
LOC110495675 LOC106575507 coding downstream 37079 16476472 ~ 16486304 (+)
LOC110495676 LOC106575553 coding downstream 47460 16486853 ~ 16496136 (+)
LOC110495683 LOC106575518 coding downstream 174256 16613649 ~ 16685491 (+)
G1520968 NA non-coding upstream 7030 16431721 ~ 16431929 (+)
G1520964 NA non-coding upstream 26384 16412220 ~ 16412575 (+)
G1520876 NA non-coding upstream 207890 16230577 ~ 16231069 (+)
G1521008 NA non-coding downstream 76713 16516106 ~ 16516354 (+)
G1521026 NA non-coding downstream 100435 16539828 ~ 16540341 (+)
G1521053 NA non-coding downstream 144272 16583665 ~ 16583951 (+)
G1521054 NA non-coding downstream 144756 16584149 ~ 16586203 (+)
G1521065 tubgcp3 non-coding downstream 160833 16600226 ~ 16600714 (+)
G1520748 NA other upstream 500141 15938230 ~ 15938818 (+)
G1520742 NA other upstream 516060 15919157 ~ 15922899 (+)
G1520649 NA other upstream 622954 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 639078 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 1222715 15207355 ~ 15251952 (+)
LOC110527374 LOC106592210 other downstream 1184423 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1326826 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1400276 17839669 ~ 17844014 (+)
G1522438 NA other downstream 1416748 17856141 ~ 17860614 (+)

Expression


Co-expression Network