G1521053


Basic Information

Item Value
gene id G1521053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16583665 ~ 16583951 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1741435
ACTGTATACTCCAGTTATCTGTAATATTGTTTGTTTTCTAACCATGACAGTTGTCGAAACATGATTTACTTACTAGATTCAAACAAGCGGGAATTGACATTGACAAGTCTGTGCGTCAAGTTTGACCTACCTAGAAAACATCTGAAGTCTGCCCCGTTTATGTCGACTACTTTCCAAGTTTCTGAAATCACTTCGATGTTAACTACTTAAGTAAATTGACCTGCTATATCGTGGATTTCCACTGTATAACTTCACATGCGTTCTGCTGCGTTCTCGAACTCCAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1741435 True 287 lncRNA 0.39 1 16583665 16583951

Neighbor

gene id symbol gene type direction distance location
LOC110495676 LOC106575553 coding upstream 87529 16486853 ~ 16496136 (+)
LOC110495675 LOC106575507 coding upstream 97361 16476472 ~ 16486304 (+)
LOC110495678 LOC106575507 coding upstream 109565 16471104 ~ 16474100 (+)
LOC110495674 LOC106575504 coding upstream 115212 16454118 ~ 16468453 (+)
LOC110495673 NA coding upstream 152312 16427597 ~ 16431410 (+)
LOC110495683 LOC106575518 coding downstream 29698 16613649 ~ 16685491 (+)
LOC110497065 LOC106574631 coding downstream 389132 16973083 ~ 16984148 (+)
LOC110495688 LOC106574622 coding downstream 403789 16987740 ~ 17001956 (+)
LOC110495691 LOC106574621 coding downstream 421078 17005029 ~ 17009539 (+)
LOC110495692 tm182 coding downstream 481926 17065877 ~ 17069278 (+)
G1521026 NA non-coding upstream 43324 16539828 ~ 16540341 (+)
G1521008 NA non-coding upstream 67311 16516106 ~ 16516354 (+)
G1520973 NA non-coding upstream 144272 16438959 ~ 16439393 (+)
G1520968 NA non-coding upstream 151736 16431721 ~ 16431929 (+)
G1521054 NA non-coding downstream 198 16584149 ~ 16586203 (+)
G1521065 tubgcp3 non-coding downstream 16275 16600226 ~ 16600714 (+)
G1521113 NA non-coding downstream 106543 16690494 ~ 16690857 (+)
G1521114 NA non-coding downstream 108523 16692474 ~ 16692701 (+)
G1520748 NA other upstream 644847 15938230 ~ 15938818 (+)
G1520742 NA other upstream 660766 15919157 ~ 15922899 (+)
G1520649 NA other upstream 767660 15756493 ~ 15816005 (+)
LOC110527374 LOC106592210 other downstream 1039865 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1182268 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1255718 17839669 ~ 17844014 (+)
G1522438 NA other downstream 1272190 17856141 ~ 17860614 (+)
G1522684 NA other downstream 1795136 18379087 ~ 18380258 (+)

Expression


Co-expression Network