G1522310


Basic Information

Item Value
gene id G1522310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17530402 ~ 17585619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742919
TGACCCCTCCCAGGCCCCTCGATCACATGGAGCTCAGTGTAGATCTGGTCTAGGTAGATGAAATCACCTTCCTTTGACGTCCCCTCGTATATACAGCCGTACTTCTTCTTAAGGTAGGATTTCAGTTTGTCTTGGACTGCAAGAAAAAACAAAGATCCAGTGAGTTTACTTTTTATATACTGCCATGGTAAcggtatgtgtttgtgtgtgtgtattgatgtcaTTATGACATGTTTTGGTCAGGTTGTTTTGTCAAATGTCTTTTTAGCAACCATAAATGATCTGGTTATTTCACCAGATAATAACCAAAATATGACATATTTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742919 True 325 lncRNA 0.39 2 17530402 17585619

Neighbor

gene id symbol gene type direction distance location
LOC118941044 NA coding upstream 61210 17448438 ~ 17469192 (+)
LOC110495692 tm182 coding upstream 461124 17065877 ~ 17069278 (+)
LOC110495691 LOC106574621 coding upstream 520863 17005029 ~ 17009539 (+)
LOC110495688 LOC106574622 coding upstream 528446 16987740 ~ 17001956 (+)
LOC110497065 LOC106574631 coding upstream 546254 16973083 ~ 16984148 (+)
mrps9 LOC106574616 coding downstream 6826 17592445 ~ 17610875 (+)
LOC110527370 LOC106575456 coding downstream 25913 17611532 ~ 17620435 (+)
LOC110527374 LOC106592210 coding downstream 38167 17623786 ~ 17631132 (+)
LOC110527377 LOC100136320 coding downstream 46060 17631679 ~ 17636584 (+)
LOC110527382 LOC106575451 coding downstream 53014 17638633 ~ 17640790 (+)
G1522298 NA non-coding upstream 25186 17504937 ~ 17505216 (+)
G1522295 NA non-coding upstream 29649 17500552 ~ 17500753 (+)
G1522291 NA non-coding upstream 33536 17496535 ~ 17496866 (+)
G1522278 NA non-coding upstream 68414 17456742 ~ 17461988 (+)
G1522233 NA non-coding upstream 138021 17392142 ~ 17392381 (+)
G1522364 NA non-coding downstream 35992 17621611 ~ 17621810 (+)
G1522368 NA non-coding downstream 52352 17637971 ~ 17638173 (+)
G1522372 NA non-coding downstream 57211 17642830 ~ 17644739 (+)
LOC110495674 LOC106575504 other upstream 1061979 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1591584 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1607503 15919157 ~ 15922899 (+)
G1520649 NA other upstream 1714397 15756493 ~ 15816005 (+)
G1522415 LOC106575491 other downstream 180600 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 254050 17839669 ~ 17844014 (+)
G1522438 NA other downstream 270522 17856141 ~ 17860614 (+)
G1522684 NA other downstream 793468 18379087 ~ 18380258 (+)

Expression


Co-expression Network