G1522337


Basic Information

Item Value
gene id G1522337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17579121 ~ 17580227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742950
cacacagcctatgtCCATGCATTAATCCCAGGTCCAGTACACACAGCCTATGTCCATGCATTAAACccaggtccaacacacacagcctatgtCCATGCATTAAACCCAGGTCCAATACACACAGCCTATGTCCATGCATTAATCCCAGGTCCAATACACACAGCCTATGTCCATGCATTAATCccagGTCCAATACACACAGCCTATGTCCATGCATTAAACCCAGGTCCAATACACACAGCCTATGTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742950 True 249 lncRNA 0.47 2 17579121 17580227

Neighbor

gene id symbol gene type direction distance location
LOC110527364 LOC105019822 coding upstream 24514 17551254 ~ 17554607 (+)
LOC118941044 NA coding upstream 109929 17448438 ~ 17469192 (+)
LOC110495692 tm182 coding upstream 509843 17065877 ~ 17069278 (+)
LOC110495691 LOC106574621 coding upstream 569582 17005029 ~ 17009539 (+)
LOC110495688 LOC106574622 coding upstream 577165 16987740 ~ 17001956 (+)
mrps9 LOC106574616 coding downstream 12218 17592445 ~ 17610875 (+)
LOC110527370 LOC106575456 coding downstream 31305 17611532 ~ 17620435 (+)
LOC110527374 LOC106592210 coding downstream 43559 17623786 ~ 17631132 (+)
LOC110527377 LOC100136320 coding downstream 51452 17631679 ~ 17636584 (+)
LOC110527382 LOC106575451 coding downstream 58406 17638633 ~ 17640790 (+)
G1522336 NA non-coding upstream 1057 17577602 ~ 17578064 (+)
G1522298 NA non-coding upstream 73905 17504937 ~ 17505216 (+)
G1522295 NA non-coding upstream 78368 17500552 ~ 17500753 (+)
G1522291 NA non-coding upstream 82255 17496535 ~ 17496866 (+)
G1522278 NA non-coding upstream 117133 17456742 ~ 17461988 (+)
G1522364 NA non-coding downstream 41384 17621611 ~ 17621810 (+)
G1522368 NA non-coding downstream 57744 17637971 ~ 17638173 (+)
G1522372 NA non-coding downstream 62603 17642830 ~ 17644739 (+)
LOC110495674 LOC106575504 other upstream 1110698 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1640303 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1656222 15919157 ~ 15922899 (+)
G1520649 NA other upstream 1763116 15756493 ~ 15816005 (+)
G1522415 LOC106575491 other downstream 185992 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 259442 17839669 ~ 17844014 (+)
G1522438 NA other downstream 275914 17856141 ~ 17860614 (+)
G1522684 NA other downstream 798860 18379087 ~ 18380258 (+)

Expression


Co-expression Network