G1522364


Basic Information

Item Value
gene id G1522364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17621611 ~ 17621810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742981
AGTAGTAATTTAACACTAAAGTCCAAAGGTAAGCCTATTAGTACTGTAGAGTGGTATTTCCGAACCCTTGAGGACCCCAACAGTACGCTTTTcattgtagccctggacaaacacCTCATTCAGCTCATTGAGGGTTTGGTgaatagttgaatcaggtgtgcttgtccagggttacaataaaaatATGTACTGTTGGGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742981 True 200 lncRNA 0.42 1 17621611 17621810

Neighbor

gene id symbol gene type direction distance location
LOC110527370 LOC106575456 coding upstream 1176 17611532 ~ 17620435 (+)
mrps9 LOC106574616 coding upstream 10736 17592445 ~ 17610875 (+)
LOC110527364 LOC105019822 coding upstream 67004 17551254 ~ 17554607 (+)
LOC118941044 NA coding upstream 152419 17448438 ~ 17469192 (+)
LOC110495692 tm182 coding upstream 552333 17065877 ~ 17069278 (+)
LOC110527374 LOC106592210 coding downstream 1976 17623786 ~ 17631132 (+)
LOC110527377 LOC100136320 coding downstream 9869 17631679 ~ 17636584 (+)
LOC110527382 LOC106575451 coding downstream 16823 17638633 ~ 17640790 (+)
LOC118936563 LOC106591654 coding downstream 83568 17705378 ~ 17715036 (+)
LOC110519433 NA coding downstream 93227 17715037 ~ 17716919 (+)
G1522310 NA non-coding upstream 35992 17530402 ~ 17585619 (+)
G1522337 NA non-coding upstream 41384 17579121 ~ 17580227 (+)
G1522336 NA non-coding upstream 43547 17577602 ~ 17578064 (+)
G1522298 NA non-coding upstream 116395 17504937 ~ 17505216 (+)
G1522295 NA non-coding upstream 120858 17500552 ~ 17500753 (+)
G1522368 NA non-coding downstream 16161 17637971 ~ 17638173 (+)
G1522372 NA non-coding downstream 21020 17642830 ~ 17644739 (+)
G1522385 NA non-coding downstream 48646 17670456 ~ 17671940 (+)
LOC110495674 LOC106575504 other upstream 1153188 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1682793 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1698712 15919157 ~ 15922899 (+)
G1520649 NA other upstream 1805606 15756493 ~ 15816005 (+)
G1522415 LOC106575491 other downstream 144409 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 217859 17839669 ~ 17844014 (+)
G1522438 NA other downstream 234331 17856141 ~ 17860614 (+)
G1522684 NA other downstream 757277 18379087 ~ 18380258 (+)

Expression


Co-expression Network