G1522414


Basic Information

Item Value
gene id G1522414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17765914 ~ 17766156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743046
TGGCCAGGTACTGTCCAGAAGAGGGCACTTCCTCTTTGTTAGGTTTGTCGTAACAGTTGACCAGGTTCTGGATCAGAGCCAGGTCTGGCCTCACCTCACTGGCCGACGTCACCGCCTGGCCAATCAACCGCAGCGCGTCTCGGATGTAGAAGGTGATGGGCTTACGACCCacctagacacatacacacacttttaaATGAATTttcaaaggtcaaataaaataaaccaatcagccaatcaatG

Function

NR:

description
glutamate receptor ionotropic, NMDA 3B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743046 True 243 lncRNA 0.49 1 17765914 17766156

Neighbor

gene id symbol gene type direction distance location
LOC110519433 NA coding upstream 48995 17715037 ~ 17716919 (+)
LOC118936563 LOC106591654 coding upstream 50878 17705378 ~ 17715036 (+)
LOC110527382 LOC106575451 coding upstream 125124 17638633 ~ 17640790 (+)
LOC110527377 LOC100136320 coding upstream 129330 17631679 ~ 17636584 (+)
LOC110527374 LOC106592210 coding upstream 134782 17623786 ~ 17631132 (+)
LOC110528768 LOC106591671 coding downstream 65294 17831450 ~ 17839017 (+)
LOC110527394 LOC106591034 coding downstream 276577 18042733 ~ 18053825 (+)
LOC110528909 LOC106595470 coding downstream 291546 18057702 ~ 18075184 (+)
LOC110495693 LOC105019803 coding downstream 310044 18076200 ~ 18093990 (+)
atr atr coding downstream 331407 18097563 ~ 18129363 (+)
G1522413 NA non-coding upstream 1447 17760733 ~ 17764467 (+)
G1522412 NA non-coding upstream 12484 17751707 ~ 17753430 (+)
G1522410 LOC100194703 non-coding upstream 18157 17747445 ~ 17747757 (+)
G1522401 LOC106591655 non-coding upstream 32844 17724115 ~ 17733070 (+)
G1522396 NA non-coding upstream 47868 17717697 ~ 17718046 (+)
G1522416 NA non-coding downstream 5223 17771379 ~ 17771651 (+)
G1522426 NA non-coding downstream 43644 17809800 ~ 17810012 (+)
G1522428 LOC106591757 non-coding downstream 47480 17813636 ~ 17814599 (+)
G1522430 NA non-coding downstream 49144 17815300 ~ 17815520 (+)
G1522433 NA non-coding downstream 53631 17819787 ~ 17819993 (+)
LOC110495674 LOC106575504 other upstream 1297491 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1827096 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1843015 15919157 ~ 15922899 (+)
LOC110495644 LOC106575583 other upstream 1966033 15796262 ~ 15801788 (+)
G1522415 LOC106575491 other downstream 63 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 73513 17839669 ~ 17844014 (+)
G1522438 NA other downstream 89985 17856141 ~ 17860614 (+)
G1522684 NA other downstream 612931 18379087 ~ 18380258 (+)
LOC110495728 LOC106574584 other downstream 828178 18594324 ~ 18595682 (+)

Expression


Co-expression Network