G1522430


Basic Information

Item Value
gene id G1522430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17815300 ~ 17815520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743064
taatatatacatgtgggtagagttattaaagtgactcatGCATATATAATAACAGGGCAATgaaagtagtctgggtagccatttgattagatgttcagtagtcttatggcttggtggtagaagctgtttagaagcctcttggaccttgacttggcgctccagtaccacttgtcgtgcggtagcagagacaacagtctatgactagggtggctggagtctat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743064 True 221 lncRNA 0.43 1 17815300 17815520

Neighbor

gene id symbol gene type direction distance location
LOC110519433 NA coding upstream 98381 17715037 ~ 17716919 (+)
LOC118936563 LOC106591654 coding upstream 100264 17705378 ~ 17715036 (+)
LOC110527382 LOC106575451 coding upstream 174510 17638633 ~ 17640790 (+)
LOC110527377 LOC100136320 coding upstream 178716 17631679 ~ 17636584 (+)
LOC110527374 LOC106592210 coding upstream 184168 17623786 ~ 17631132 (+)
LOC110528768 LOC106591671 coding downstream 15930 17831450 ~ 17839017 (+)
LOC110527394 LOC106591034 coding downstream 227213 18042733 ~ 18053825 (+)
LOC110528909 LOC106595470 coding downstream 242182 18057702 ~ 18075184 (+)
LOC110495693 LOC105019803 coding downstream 260680 18076200 ~ 18093990 (+)
atr atr coding downstream 282043 18097563 ~ 18129363 (+)
G1522428 LOC106591757 non-coding upstream 701 17813636 ~ 17814599 (+)
G1522426 NA non-coding upstream 5288 17809800 ~ 17810012 (+)
G1522416 NA non-coding upstream 43649 17771379 ~ 17771651 (+)
G1522414 NA non-coding upstream 49144 17765914 ~ 17766156 (+)
G1522413 NA non-coding upstream 50833 17760733 ~ 17764467 (+)
G1522433 NA non-coding downstream 4267 17819787 ~ 17819993 (+)
G1522434 NA non-coding downstream 5573 17821093 ~ 17821606 (+)
G1522449 slc7a14 non-coding downstream 28741 17844261 ~ 17844493 (+)
G1522450 LOC106591672 non-coding downstream 29034 17844554 ~ 17845026 (+)
G1522415 LOC106575491 other upstream 48606 17766219 ~ 17766694 (+)
LOC110495674 LOC106575504 other upstream 1346877 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1876482 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1892401 15919157 ~ 15922899 (+)
G1522437 LOC106575479 other downstream 24149 17839669 ~ 17844014 (+)
G1522438 NA other downstream 40621 17856141 ~ 17860614 (+)
G1522684 NA other downstream 563567 18379087 ~ 18380258 (+)
LOC110495728 LOC106574584 other downstream 778814 18594324 ~ 18595682 (+)
LOC118936474 LOC106574488 other downstream 900342 18702289 ~ 18722091 (+)

Expression


Co-expression Network