Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522685 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 18380682 ~ 18381894 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743411 | True | 208 | lncRNA | 0.47 | 2 | 18380682 | 18381894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497069 | ppp2r3a | coding | upstream | 75445 | 18251738 ~ 18305237 (+) |
| LOC110517300 | LOC106575446 | coding | upstream | 156542 | 18176721 ~ 18224140 (+) |
| LOC110495710 | LOC106574671 | coding | upstream | 222181 | 18156850 ~ 18158501 (+) |
| LOC110495707 | LOC106574672 | coding | upstream | 235201 | 18143136 ~ 18145481 (+) |
| LOC110495694 | LOC106575448 | coding | upstream | 243743 | 18129571 ~ 18136939 (+) |
| LOC110497071 | LOC106574566 | coding | downstream | 66540 | 18448434 ~ 18480492 (+) |
| tspan37 | LOC106574474 | coding | downstream | 98883 | 18480777 ~ 18484626 (+) |
| elavl1a | LOC106574475 | coding | downstream | 106828 | 18488722 ~ 18498859 (+) |
| LOC110495722 | NA | coding | downstream | 160004 | 18541898 ~ 18544024 (+) |
| LOC110495724 | LOC106575427 | coding | downstream | 168146 | 18550040 ~ 18554461 (+) |
| G1522641 | NA | non-coding | upstream | 118626 | 18261812 ~ 18262056 (+) |
| G1522640 | NA | non-coding | upstream | 119186 | 18261212 ~ 18261496 (+) |
| G1522639 | NA | non-coding | upstream | 121531 | 18258930 ~ 18259151 (+) |
| G1522606 | NA | non-coding | upstream | 136156 | 18244295 ~ 18244526 (+) |
| G1522632 | NA | non-coding | downstream | 11090 | 18392984 ~ 18411251 (+) |
| G1522707 | NA | non-coding | downstream | 76797 | 18458691 ~ 18459237 (+) |
| G1522637 | NA | non-coding | downstream | 82028 | 18463922 ~ 18472624 (+) |
| G1522708 | NA | non-coding | downstream | 85615 | 18467509 ~ 18468489 (+) |
| G1522716 | NA | non-coding | downstream | 90886 | 18472780 ~ 18473999 (+) |
| G1522684 | NA | other | upstream | 424 | 18379087 ~ 18380258 (+) |
| G1522438 | NA | other | upstream | 520068 | 17856141 ~ 17860614 (+) |
| G1522437 | LOC106575479 | other | upstream | 536668 | 17839669 ~ 17844014 (+) |
| G1522415 | LOC106575491 | other | upstream | 613988 | 17766219 ~ 17766694 (+) |
| LOC110527374 | LOC106592210 | other | upstream | 753038 | 17623786 ~ 17631132 (+) |
| LOC110495728 | LOC106574584 | other | downstream | 212440 | 18594324 ~ 18595682 (+) |
| LOC118936474 | LOC106574488 | other | downstream | 333968 | 18702289 ~ 18722091 (+) |
| LOC110495746 | LOC106574508 | other | downstream | 577550 | 18959384 ~ 18978475 (+) |
| G1523506 | NA | other | downstream | 640111 | 19022005 ~ 19022395 (+) |
| G1523526 | LOC106574589 | other | downstream | 744370 | 19101756 ~ 19142175 (+) |
