G1533378


Basic Information

Item Value
gene id G1533378
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27187622 ~ 27189549 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1755359
tgtcattagttgtctctgattgagaatcatacttaggtagcctgggttgcactgtttgtttgtgggtgattgtctatgttagtggcttgtgtcagcacaggtctcattttgtagcttcacggtcgaatttggtttattgtttttgttactcttttgtatagtgttcagtctttctttattaaaggttttaccatggacacttaccacgccgcatattggtcctctgatccttctcgcctctcctcttcagacgaagaggaggacgaccgtgacaataatcaagacctctacaaatactcagccctgccacttccacgctgccagatcgtaatctctgctcaTTCTGCCCGCTCTGAATCTGGTCCAtgtctccagtcccacgtctcgtcatcctgctactctgtcctggattctccactctactactcccttggattcccctccaggcctgcttaccctgtctcaacccctctcgctccagcctcaacctccgcacctggtttccaGCAACCC
>TU1755360
atgaggaggcagcacggcagtgcgacaggttttaccatggacacttaccacgccgcatattggtcctctgatccttctcgcctctcctcttcagacgaagaggaggacgaccgtgacaataatcaagacctctacaaatactcagccctgccacttccacgctgccagatcgtaatctctgctcaTTCTGCCCGCTCTGAATCTGGTCCAtgtctccagtcccacgtctcgtcatcctgctactctgtcctggattctccactctactactcccttggattcccctccaggcctgcttaccctgtctcaacccctctcgctccagcctcaacctccgcacctggtttccaGCAACCC

Function

NR:

description
uncharacterized protein LOC110487741, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1755359 False 513 TUCP 0.49 2 27187622 27188230
TU1755360 True 357 TUCP 0.55 3 27187622 27189549

Neighbor

gene id symbol gene type direction distance location
LOC110495935 fstl1 coding downstream 2174 27158978 ~ 27185448 (-)
LOC110495934 LOC106574305 coding downstream 31335 27152195 ~ 27156287 (-)
LOC110495932 LOC106574304 coding downstream 47135 27096980 ~ 27140487 (-)
LOC110495931 LOC106574302 coding downstream 104545 27065029 ~ 27083077 (-)
LOC110495928 LOC106574300 coding downstream 595427 26513620 ~ 26592195 (-)
LOC110495936 LOC106574306 coding upstream 25517 27215066 ~ 27219473 (-)
LOC110495938 LOC106574308 coding upstream 67937 27257486 ~ 27364364 (-)
LOC110495941 LOC100196748 coding upstream 199160 27388709 ~ 27395340 (-)
LOC118941127 NA coding upstream 334310 27523859 ~ 27526447 (-)
LOC110495945 LOC106574379 coding upstream 383982 27573531 ~ 27607434 (-)
G1533367 NA non-coding downstream 16568 27170588 ~ 27171054 (-)
G1533288 NA non-coding downstream 72396 27035775 ~ 27115226 (-)
G1533235 NA non-coding downstream 154920 27027800 ~ 27032702 (-)
G1532505 NA non-coding downstream 293960 26893415 ~ 26893662 (-)
G1532504 NA non-coding downstream 294342 26892971 ~ 26893280 (-)
G1533380 NA non-coding upstream 73 27189622 ~ 27189973 (-)
G1533383 NA non-coding upstream 3609 27193158 ~ 27193378 (-)
G1533387 NA non-coding upstream 6286 27195835 ~ 27196116 (-)
G1533388 NA non-coding upstream 7054 27196603 ~ 27207572 (-)
G1533415 NA non-coding upstream 51061 27240610 ~ 27240818 (-)
G1531236 NA other downstream 1478748 25696539 ~ 25708874 (-)
LOC110495915 NA other downstream 1613951 25571910 ~ 25574981 (-)
G1531142 NA other downstream 1664442 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 2036628 25150068 ~ 25150994 (-)
G1529613 NA other downstream 2793938 24393375 ~ 24393684 (-)
LOC110495948 LOC106574314 other upstream 564625 27754174 ~ 27798978 (-)
LOC110496785 LOC106574363 other upstream 671497 27839770 ~ 27914607 (-)
LOC110495955 LOC106574324 other upstream 845415 27995381 ~ 28092196 (-)
LOC110495963 LOC106574327 other upstream 1161829 28241494 ~ 28368147 (-)
G1536703 NA other upstream 3094823 30284372 ~ 30284762 (-)

Expression


Co-expression Network