G1534198


Basic Information

Item Value
gene id G1534198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 28387391 ~ 28387887 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1756241
cccataacatgatgcaaccaccacatgcttaaaatatgaagagtggtactcagtaatgtgttgtgttgaatttgccacaaacataactcttttttgcagtattacttaagtgccttgttgcaaacaggatgcatggttTGGAATATTTTAATTCTGTGCAtgctttcttttcactctgtcatttaggttaatgTAATGGAGTGACTTcaacgttgttgatccatcctccgtttTCTCATTTCACAACcattaaaatcaccattggcctcattggaGCGGTCTTTATATGTACCACAGAagaaccaagaaatgaagagcgacACCATGGCTGTCTTTTGGGGCTTTTATGTAGATCTGATAATCGTCAGGTTAGGAATGAAAAGTCAGGTTAGGAATGATTATCAGGCTTCAATGCACCGTCTGAcaagttgttctctctctctctgttttcacgGACCCACACAATCACATTTATAGATAAAGCAAtactgtataga

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1756241 True 497 lncRNA 0.39 1 28387391 28387887

Neighbor

gene id symbol gene type direction distance location
LOC110495963 LOC106574327 coding downstream 19244 28241494 ~ 28368147 (-)
LOC110495961 LOC106574325 coding downstream 187633 28124599 ~ 28199758 (-)
LOC110495955 LOC106574324 coding downstream 295195 27995381 ~ 28092196 (-)
LOC110495959 LOC106574321 coding downstream 392095 27985466 ~ 27995296 (-)
prkag3a LOC106575098 coding downstream 404686 27974808 ~ 27982705 (-)
LOC110495969 LOC106574334 coding upstream 284942 28672829 ~ 28675992 (-)
LOC110495970 app coding upstream 301235 28689122 ~ 28731312 (-)
LOC110495971 cyyr1 coding upstream 351131 28739018 ~ 28758685 (-)
LOC110495973 LOC106574336 coding upstream 372785 28760672 ~ 28768063 (-)
LOC110495974 LOC106574337 coding upstream 383463 28771350 ~ 28805355 (-)
G1534193 NA non-coding downstream 1997 28385114 ~ 28385394 (-)
G1534184 NA non-coding downstream 9224 28377667 ~ 28378167 (-)
G1534174 NA non-coding downstream 17000 28370095 ~ 28370391 (-)
G1534150 NA non-coding downstream 42072 28345036 ~ 28345319 (-)
G1534036 NA non-coding downstream 146663 28240503 ~ 28240728 (-)
G1534205 NA non-coding upstream 6842 28394729 ~ 28395000 (-)
G1534217 NA non-coding upstream 14952 28402839 ~ 28403055 (-)
G1534218 NA non-coding upstream 16211 28404098 ~ 28404307 (-)
G1534238 NA non-coding upstream 28336 28416223 ~ 28416431 (-)
G1534259 NA non-coding upstream 47545 28435432 ~ 28435686 (-)
LOC110496785 LOC106574363 other downstream 472871 27839770 ~ 27914607 (-)
LOC110495948 LOC106574314 other downstream 588778 27754174 ~ 27798978 (-)
G1533378 NA other downstream 1197842 27187622 ~ 27189549 (-)
G1536703 NA other upstream 1896485 30284372 ~ 30284762 (-)
G1537022 NA other upstream 2132005 30519892 ~ 30525373 (-)
G1537091 NA other upstream 2214829 30602716 ~ 30603392 (-)
LOC110495992 LOC106588166 other upstream 2523940 30911827 ~ 30955199 (-)
LOC110495994 LOC106588168 other upstream 2623991 31008756 ~ 31014201 (-)

Expression


Co-expression Network