Gene
RNA
| Item | Value |
|---|---|
| gene id | G1538557 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 31648271 ~ 31648577 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1760932 | True | 307 | lncRNA | 0.40 | 1 | 31648271 | 31648577 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496005 | s10a4 | coding | downstream | 112895 | 31530404 ~ 31535376 (-) |
| LOC110496004 | LOC106588173 | coding | downstream | 123388 | 31492852 ~ 31524883 (-) |
| LOC110496926 | NA | coding | downstream | 189184 | 31458837 ~ 31459087 (-) |
| LOC110495998 | LOC106588170 | coding | downstream | 551988 | 31090655 ~ 31096283 (-) |
| LOC110495999 | NA | coding | downstream | 562828 | 31077176 ~ 31085443 (-) |
| LOC100136047 | LOC106605923 | coding | upstream | 36263 | 31684840 ~ 31692733 (-) |
| ash1l | LOC106588182 | coding | upstream | 73937 | 31722514 ~ 31769106 (-) |
| LOC110496013 | LOC106588183 | coding | upstream | 123035 | 31771612 ~ 31777330 (-) |
| LOC110496014 | LOC106588184 | coding | upstream | 130687 | 31779264 ~ 31784592 (-) |
| LOC110496016 | LOC106588185 | coding | upstream | 148491 | 31797068 ~ 31802818 (-) |
| G1538550 | NA | non-coding | downstream | 5069 | 31643002 ~ 31643202 (-) |
| G1538548 | NA | non-coding | downstream | 8470 | 31639557 ~ 31639801 (-) |
| LOC110496009 | LOC106588178 | non-coding | downstream | 12208 | 31628863 ~ 31654236 (-) |
| G1538535 | NA | non-coding | downstream | 26687 | 31620148 ~ 31621584 (-) |
| G1538492 | NA | non-coding | downstream | 66679 | 31581341 ~ 31581592 (-) |
| G1538561 | NA | non-coding | upstream | 9422 | 31657999 ~ 31658588 (-) |
| G1538596 | NA | non-coding | upstream | 66922 | 31715499 ~ 31715738 (-) |
| G1538602 | NA | non-coding | upstream | 92905 | 31741482 ~ 31741850 (-) |
| LOC110495994 | LOC106588168 | other | downstream | 634095 | 31008756 ~ 31014201 (-) |
| LOC110495992 | LOC106588166 | other | downstream | 694963 | 30911827 ~ 30955199 (-) |
| G1537091 | NA | other | downstream | 1044879 | 30602716 ~ 30603392 (-) |
| G1537022 | NA | other | downstream | 1122898 | 30519892 ~ 30525373 (-) |
| G1538595 | NA | other | upstream | 65929 | 31714506 ~ 31715181 (-) |
| atp5if1a | LOC106588193 | other | upstream | 408734 | 32057280 ~ 32058819 (-) |
| G1539348 | NA | other | upstream | 913149 | 32561726 ~ 32562120 (-) |
| G1540148 | NA | other | upstream | 1251001 | 32899578 ~ 32936569 (-) |
