Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543605 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36315839 ~ 36316263 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1766450 | True | 425 | lncRNA | 0.44 | 1 | 36315839 | 36316263 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ext1b | LOC103365060 | coding | downstream | 7441 | 36196135 ~ 36308398 (-) |
| LOC110496110 | LOC106588509 | coding | downstream | 214922 | 36084134 ~ 36100917 (-) |
| LOC110496109 | LOC106588511 | coding | downstream | 238540 | 36068180 ~ 36077299 (-) |
| LOC110496104 | LOC106588515 | coding | downstream | 334891 | 35975293 ~ 35980948 (-) |
| LOC110496103 | LOC106588514 | coding | downstream | 344122 | 35918293 ~ 35971717 (-) |
| samd12 | LOC106588503 | coding | upstream | 20252 | 36336515 ~ 36461461 (-) |
| abrab | LOC106570048 | coding | upstream | 148307 | 36464570 ~ 36465358 (-) |
| angpt1 | LOC106588502 | coding | upstream | 182549 | 36498812 ~ 36560713 (-) |
| LOC110496117 | LOC106612724 | coding | upstream | 428115 | 36744378 ~ 36747323 (-) |
| sdc2 | LOC106570046 | coding | upstream | 442922 | 36759185 ~ 36793397 (-) |
| G1543428 | NA | non-coding | downstream | 121994 | 36192748 ~ 36193845 (-) |
| G1543390 | NA | non-coding | downstream | 211335 | 36104279 ~ 36104504 (-) |
| G1543364 | NA | non-coding | downstream | 272680 | 36042400 ~ 36043159 (-) |
| G1543639 | NA | non-coding | upstream | 51669 | 36367932 ~ 36369697 (-) |
| G1543727 | NA | non-coding | upstream | 160870 | 36477133 ~ 36477477 (-) |
| G1543739 | NA | non-coding | upstream | 169527 | 36485790 ~ 36486155 (-) |
| G1543850 | NA | non-coding | upstream | 247036 | 36563299 ~ 36563531 (-) |
| G1543853 | NA | non-coding | upstream | 248671 | 36564934 ~ 36565274 (-) |
| G1543346 | LOC106588513 | other | downstream | 303153 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 811682 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 818857 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 966177 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1135811 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 985245 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1605892 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1831327 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1848987 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 2243386 | 38557052 ~ 38563365 (-) |
